Gene Cyan7425_3983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_3983 
Symbol 
ID7289930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp4016416 
End bp4016901 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content55% 
IMG OID643586954 
Product2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_002484658 
Protein GI220909347 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000875959 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTTCTA TTCGCATCGG TAATGGTTAC GATATTCATC GCCTGGTTAG CGATCGCCCC 
CTAATTTTGG GTGGTGTCAA TATTCCCCAC GAGTTGGGTT TGCTCGGTCA CAGCGATGCC
GATGTGCTCA CCCATGCGAT TATGGATGCC CTGCTGGGAG CGCTCAGTCT GGGGGATATT
GGCCATTACT TTCCGCCCGG TGATCCGCAA TGGGCCGGGG CAGATAGCCT TAAACTTTTA
GCGCAGGTGC ATCAACTGGT GCAGGAACGG GGCTGGCAGG TCGGCAATAT TGACTCCGTG
ATTGTGGCGG AACGGCCCAA ACTTAAACCC CATCTGGCCG CTATGCGCGA TCGCCTCTCC
GCTGTCCTCA AGGTTAAGCC TGATCAGATT GGCATTAAAG CAACTACGAA CGAAAAGCTT
GGCCCGGAAG GACGGGAAGA GGGAATTTGT GCCTACGCCG TTGCGGTGCT GGTCTCAGTT
GCCTGA
 
Protein sequence
MTSIRIGNGY DIHRLVSDRP LILGGVNIPH ELGLLGHSDA DVLTHAIMDA LLGALSLGDI 
GHYFPPGDPQ WAGADSLKLL AQVHQLVQER GWQVGNIDSV IVAERPKLKP HLAAMRDRLS
AVLKVKPDQI GIKATTNEKL GPEGREEGIC AYAVAVLVSV A