Gene Cyan7425_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_3948 
Symbolfmt 
ID7289894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp3970137 
End bp3971141 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content55% 
IMG OID643586920 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_002484625 
Protein GI220909314 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG TATTTTGGGG AACTCCCAGC TTTGCGGTTC CCAGCCTGGA GAGATTGCTG 
CGGGAACCCG ATTGTGAGGT CTTGGGAGTG GTGACCCAAC CAGATAAGCG GCGGGGACGG
GGCAATCAAC TGCAACCGGA AGCCGTTAAA AAAGTGGCTC TGGCCCACAA TCTCCCCCTG
TGGCAACCGC AACGGGTGAA GAAGGATGCA GCTACTCTGG CGGATTTGCG ATCGCTGGCG
GCGGACTTTT TTGTCGTGGT TGCTTATGGA CAGATCCTGT CTCCAGAAAT TCTGGCCATG
CCCCGCTTGG GTTGTATTAA TAATCACGCC TCTCTATTAC CCAGGTATCG GGGAGCCGCA
CCGATCCAGT GGTCGCTTTA CAACGGCGAG ACGGAAACCG GCATTACGAC CATGCTGATG
GATGCGGGGA TGGATACGGG AGCTATGCTG CTGCAACGCA CGTTGGTGGT GGGCTTGCTG
GAAAATGCTG AGCAGGTCAG TCAGCGCTTG GCAGAACTGG GGGCAGATTT AGTGGTGGAA
ACATTGCGCC AGCAGGTGGT GGGGCAGCTT CAACCCATTC CCCAGGACAA TAGCCAGGCG
ACCTATGCAC CCCTGATTAA AAAAGAAGAC TATGGGCTGG ATTGGCACAA ATCGGCGATC
GCCCTGCAGA ATCAAATTCG CGGTTTTTAC CCGGATTGCC AGACTAGCCT GCGGGGCCAA
CCCCTGAAAG TGAGTGCTAC TCTGCCTCTG GGTTCAGCCT ATTGGTCAGC CTTACCCCCT
GAATTTCAAG CTCTGGCTCC ACAGTGGACT GACGAGCGCT TTGCAGAAAA CCATCCCCCC
GGTAGTGTTA TTGGTCTGGC TAAAAACCTT GGCCCAATTA TCCAGACAGG TGCGGGAGGA
TTGTTATTGC TCCAGGTGCA GCCCGCCGGT AAACGCATTC AGTCGGGTTG GGACTTTGTC
AATGGGGCCC GCCTCCAGAT TGGTGAACAG TTAGGTTTAA CTTGA
 
Protein sequence
MKIVFWGTPS FAVPSLERLL REPDCEVLGV VTQPDKRRGR GNQLQPEAVK KVALAHNLPL 
WQPQRVKKDA ATLADLRSLA ADFFVVVAYG QILSPEILAM PRLGCINNHA SLLPRYRGAA
PIQWSLYNGE TETGITTMLM DAGMDTGAML LQRTLVVGLL ENAEQVSQRL AELGADLVVE
TLRQQVVGQL QPIPQDNSQA TYAPLIKKED YGLDWHKSAI ALQNQIRGFY PDCQTSLRGQ
PLKVSATLPL GSAYWSALPP EFQALAPQWT DERFAENHPP GSVIGLAKNL GPIIQTGAGG
LLLLQVQPAG KRIQSGWDFV NGARLQIGEQ LGLT