Gene Cyan7425_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_3938 
Symbol 
ID7289884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp3961279 
End bp3962565 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content35% 
IMG OID643586910 
ProductTPR repeat-containing protein 
Protein accessionYP_002484615 
Protein GI220909304 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.479831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.839972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGATC CTTTTGTTAC TTTAAAGGCT CAGCAACAAG ACTTTATAAA AAGGCTAAAG 
TCTGAGACTT CTACTTTAGA ACACTTAAAT AGTAGTCAAG CAAAAGGTTG CTATAGTGAG
TTGACTGTAA TTTCAGGATA CGAATTAGAC GAAATAAAAC GCTACTGTTG GAAAATTGTA
GATAAATATT TCTTGGAATC GAGACAATAC AACAAGGTTG AAACAGGTAA GTATTCTCAA
ACTGAAAGCC TAGAGGTTTA TGTCAGAAAT CTTGTTGGGA AACTCGGAGA ACTGGTTGTA
AAAAGATACT TGGACTTATT GATAACAGAT ATTGACTTTG ACGTTTACGA TAAGGTTGGT
GACGGTGGTT TTGATTTTGT GTTAGTTTCT AATCCAGATA AGCTTATACA AGTAAAAACT
CGTCAAGGCA AGTCAATAGA TAAAATTAAG TGGGTAGTAA GTCAAGACGA GATCAAAAGG
AACGATGCTC TTATCTGTTT ATGGATTCAG GAGGATATTA GTGAGTCGCA ATCTACTTAC
CATTTAGTGA ATGCTGGCTT TATTCCGATG TCCATGCTTA ACAATAAACA GCGACTTGGA
ATACAAGACT TACTTTATGG AGGCGGATTA AAGGCGTATC TTAATCATTA CGTGTGCTCT
ACAACTTTTG TTGAATCTGA AAAATCGAGA ATAGATAATT TAGTTTTACT CGCGGATCAG
TCTTTTGCAA ATAAAGCCTA CGATGAGTCG CTAAAATATT GTAATGAGAT ATTGCAAATA
GATGATAAAA ATTATAGAGC TTATCATCTT AAGGCTGAAA TTTGTTTAAG CAATAAACAA
GATCTTGAGG CAATAAAAAT ACTATCTGAT GCCATTGAAG ATACGCAAGC TCACGAACTA
TATTTTTTTC GTGGAGTTGT ATGGAGTAAA ATAGCTGATC AATATATGAA GAAGTACTAC
TCAAGCAATG TAAATGGCAA TCGTTATTTG CAATACTCTA TTCAAGATTA TAGTCGAGCC
ATTGAACTTG AGCCGAGCTT TGCAAAGGCG TATTACCATC GCTCTCGTAT TTACCTGTTT
CTAGGGCGAA GACAAGAAGC CATTGAGAAT GCCTGGCATG CTATGCAGTT ATTGTCAACG
CAATCCAACT TGAGTGAGTA TGCCAAAATA GAAGGGTATT TTAAAGAAAA ATTTACTGAA
TCCGAAATAG AGAAATACTT AAATCCAGAA CTTTACGAAA AAAAAGAGAG AGAGCTTAAA
TCTCTTTATG ATGATATCCC TTTTTGA
 
Protein sequence
MQDPFVTLKA QQQDFIKRLK SETSTLEHLN SSQAKGCYSE LTVISGYELD EIKRYCWKIV 
DKYFLESRQY NKVETGKYSQ TESLEVYVRN LVGKLGELVV KRYLDLLITD IDFDVYDKVG
DGGFDFVLVS NPDKLIQVKT RQGKSIDKIK WVVSQDEIKR NDALICLWIQ EDISESQSTY
HLVNAGFIPM SMLNNKQRLG IQDLLYGGGL KAYLNHYVCS TTFVESEKSR IDNLVLLADQ
SFANKAYDES LKYCNEILQI DDKNYRAYHL KAEICLSNKQ DLEAIKILSD AIEDTQAHEL
YFFRGVVWSK IADQYMKKYY SSNVNGNRYL QYSIQDYSRA IELEPSFAKA YYHRSRIYLF
LGRRQEAIEN AWHAMQLLST QSNLSEYAKI EGYFKEKFTE SEIEKYLNPE LYEKKERELK
SLYDDIPF