| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3777 |
|---|
| Symbol | |
|---|
| ID | 7289722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 3784602 |
|---|
| End bp | 3787808 |
|---|
| Gene Length | 3207 bp |
|---|
| Protein Length | 1068 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643586751 |
|---|
| Product | PAS/PAC sensor hybrid histidine kinase |
|---|
| Protein accession | YP_002484457 |
|---|
| Protein GI | 220909146 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0640729 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTAC CCTGCTATGA CAGCCCGGAG TTGACCGGCT GGTTTCGCAA TGTTGTTGTC
AAAGTCAAGG ATGGCATTGC CATTTCTTTT AGCAATATTA CTGACCGCAA ACAAGCAGAT
TTAGCCCGAC AACAACAGGA GCAACATTTC AAGATCGCAC TCCAAACAGC CAAACTCGGT
TCCTGGGAAC ACGATCTGAC CACAGGGGTG CTCACCTGTT CTGCCCAATG TAAAGCAAAT
TTTGGCTTAC CCCCCGATGC TGAATTCACC CACGACACCT TATTTGCAGC CCTTCATCCC
GACGATCGCC CCAGGGTTGA GGCGGCTATT CAACGAGCGA TCGCCCAGCG AACTGACTAT
GAGGTAGAGG AACGCTGTTA CCACCCCGAT GGCAGTCTGC ACTGGCTGAT CGTGCGGGGG
CGACTGGTGT ATGACGCCAA CGATACGCCA ATTCGGATGG TGGGGGTCAC CCTCGACATC
ACGCCCCAGA AGCAAACAGA GAAAACCCTG CGGCAAAGTG AAGAACGGCT CCGAATTGCT
CAGCAAGCCG CCAATGCTGG GGTGTGGAAC TGGGATATTC CCACGAATCA AGTGACCTGG
TCAGCGGAAT ACTATCGCCT TTATGGTCTA GATCCGGCCC GCACGGCCCC TTCCTATCAA
AACTGGCTGA ATTCAGTAGT TGAGCAGGAT CGCGATCGGG TGCACCAGGC AGCTCAAGCG
GCTTTATCGG ATCGGATTGA TCTGAATGTG GAGTTTCGCA TCCTCCATCC CACCGAGGGG
GAGCGGTGGC TAACGGCGAT CGGGCAAACC CTATTTGACG ACACCGGCCA ACCGAAACGG
ATGACGGGGA TAGCCCTGGA CATCACACAG CGCAAACAGG CAGAGAAAAC CTTACAACGC
TATCAACTGC TGTCGGAGTA TAGCCGCGAT ATTGTGCTCT ATATCAGCCG GAAGGGCCAA
ATTCTGGAAG CCAACCAGGC CGCCGTCAAG GCTTACGGTT ATAGTCGAAA CGAGTTGCTG
AACTTGCAGC TGGCCGATCT ACGGGCAATC CAAACTTTAC CTCTCCTCTG GCAGCAGTTT
GAGCAGGCCA GTGAGGGTGG CATTTTATTT GAAACCATCC ATCAGCGCAA AGATGGCAGT
CAATTTCCAG TCGAAGTGAG TGCTCAGAGT GCCGTCATTG ATGGAGAGAT GGGGGTTTTG
AGTGTGATTC GGGATATTTC CGATCGACGC CGTTCTGAAA TCGCCCTGCG CAAGAGTGAG
GAATGGGCCA GGCTGGCAAT TCAAATTGGG CGGGTGGGGG GGTGGCGGCT GTACCTCGAT
CAAAACCTGG TGGAAATGGA CGAACGGCTG CGGGAAATTT GGGGAGAGTC CAAAGATGCG
GTGATGGTCC CGATAGCGAA AGCAATGGAG CGGATTCATC CCGACGATCG CGAACGGGTC
AAGCAAGCGG TGTATGCGGC CATCGATCCA GCGTCCCCAG GCACTTACGA GATTGAGTAC
CGTATTGTCT GGGAGGACGG CAGCGAACGT TGGGTGTTAG CCAAGGGACA GGCTCAATTT
GAAGGGGAAG CAGGATCACG TCAAGCGGTT GATTTTTTTG GCACCCTGCT AGATATTACC
GAGCACAAAC AGGCGGAAAC GGCACTACGA ACGACTGCGG AGCGATTAGG TTTAGCCTTG
ACCGCCGCAA AACTGGGGGA TTGGAGTTGG AATGCAGCCA CGGACATCGT CACCTTTTCT
GAGCAAGCTG CAGCCATGTT TGGGATTCCC CCTGGCCCCT ACATGACCTG GAGCCAAATA
CAAAACCTGC TGCATGTTGA CGATCGAGCC CGAGCCCGCT TACAGGTTGA ACAGGCGATC
GCAGAGCACA GTGATTACGA CATTGAGTAT CGGGTCGTAG ATCGGCAGGG CAGGGAACGG
TGGATTGCCG CTAAAGGTCG GGCCCAGTAC GACTCTTCTG GACAGGTGTT AGGCATGCTC
GGGGTCGTCC AGGACATTAC CCACCGCAAG CAAGCTGAGG CAGAAAGGGA AGAGTTACTA
GCACGGGAAC GGGCAGCACG GGAAGCGGCT GAACAGGCGA ATCGGATCAA GGATGAATTT
CTGGCCGTTC TCTCCCATGA ACTGCGATCG CCCCTCAATC CAATTCTGGG CTGGTCCAAG
TTACTGCTGA ACGGCAAACT GAACCTCGCC AAGACCCAAC AGGCCCTGAC CACGATTGAG
CGCAATGCCC GCTTGCAATC CGAACTGATC GAAGACTTAC TTGATGTTTC GCGCATTTTG
CAGGGAAAAC TCAGCCTGTC CGTCAGTTCG GTGGATTTAG CCTCAACCAT TCAGGCGGCG
ATCGAGACCG TACGACTGGC CGCAGAAGCT AAGTCCATTC AGATCGAGAC CCGTCTGGCC
CCCGACGTAG GCTTAGTAGC AGGGGACTCA ACCCGATTAC AGCAAGTGGT ATGGAATCTG
GTCTCCAATG GGGTGAAATT TACTCCAGCA GGCGGGCGAG TAGCCGTGCG GTTAGAACAG
CTCGAGCAGC AGGCCCAAAT TACCATCAGC GATACGGGCA AAGGCATTGC ACCTGACTTT
CTTCCCCATG TGTTTGACTA CTTCCGCCAG GAAGATGGGG CGACAACTCG TAAGTTTGGT
GGTCTGGGCT TAGGGCTGGC GATCGTGCGT CACCTGGTCG AGTTACACGG CGGGACAATT
CAAGCCCATA GTCCTGGGGA AGGGCTGGGG GCCACCTTCA CCGTTCGCTT GCCCCTCTTA
CCCACTCAGC CCAATCGCCC GTCGGCCCTA CCAGCCCCGG AACACCCCCC AGACTTAGCG
GGCATCCAGG TTTTAGTTGT GGATGACGAT ACGGATACAC GAGACTTAGT TATTTTTCTA
TTAGAACAAG CTGGAGCAAC GGTGCTTTCT GCCGCTTCTG CCTCTGAAGC CTTGCTCAGC
CTCAGCCAGA CCCAACCCGA TCTGCTGATC AGTGATATTG GCATGCCGGA GATGGATGGC
TATATGTTGC TGCGACAGGT GCGAGCGTTA CCCACGGACC AGGGGGGAGA AATTCCGGCG
ATCGCGTTGA CGGCCTATGC AGGCGAAATC GACCATCAAC AAACCCTGGC AGCCGGATTC
CAACACCATA TCGTCAAACC CGTGGACCCG GAAGTCTTAA TTCAGACCAT TAGCCTTTTA
CATCACACTG GTAAAGGGTC TGCCTGA
|
|---|
| Protein sequence | MRLPCYDSPE LTGWFRNVVV KVKDGIAISF SNITDRKQAD LARQQQEQHF KIALQTAKLG
SWEHDLTTGV LTCSAQCKAN FGLPPDAEFT HDTLFAALHP DDRPRVEAAI QRAIAQRTDY
EVEERCYHPD GSLHWLIVRG RLVYDANDTP IRMVGVTLDI TPQKQTEKTL RQSEERLRIA
QQAANAGVWN WDIPTNQVTW SAEYYRLYGL DPARTAPSYQ NWLNSVVEQD RDRVHQAAQA
ALSDRIDLNV EFRILHPTEG ERWLTAIGQT LFDDTGQPKR MTGIALDITQ RKQAEKTLQR
YQLLSEYSRD IVLYISRKGQ ILEANQAAVK AYGYSRNELL NLQLADLRAI QTLPLLWQQF
EQASEGGILF ETIHQRKDGS QFPVEVSAQS AVIDGEMGVL SVIRDISDRR RSEIALRKSE
EWARLAIQIG RVGGWRLYLD QNLVEMDERL REIWGESKDA VMVPIAKAME RIHPDDRERV
KQAVYAAIDP ASPGTYEIEY RIVWEDGSER WVLAKGQAQF EGEAGSRQAV DFFGTLLDIT
EHKQAETALR TTAERLGLAL TAAKLGDWSW NAATDIVTFS EQAAAMFGIP PGPYMTWSQI
QNLLHVDDRA RARLQVEQAI AEHSDYDIEY RVVDRQGRER WIAAKGRAQY DSSGQVLGML
GVVQDITHRK QAEAEREELL ARERAAREAA EQANRIKDEF LAVLSHELRS PLNPILGWSK
LLLNGKLNLA KTQQALTTIE RNARLQSELI EDLLDVSRIL QGKLSLSVSS VDLASTIQAA
IETVRLAAEA KSIQIETRLA PDVGLVAGDS TRLQQVVWNL VSNGVKFTPA GGRVAVRLEQ
LEQQAQITIS DTGKGIAPDF LPHVFDYFRQ EDGATTRKFG GLGLGLAIVR HLVELHGGTI
QAHSPGEGLG ATFTVRLPLL PTQPNRPSAL PAPEHPPDLA GIQVLVVDDD TDTRDLVIFL
LEQAGATVLS AASASEALLS LSQTQPDLLI SDIGMPEMDG YMLLRQVRAL PTDQGGEIPA
IALTAYAGEI DHQQTLAAGF QHHIVKPVDP EVLIQTISLL HHTGKGSA
|
|---|
| |