| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3772 |
|---|
| Symbol | |
|---|
| ID | 7289717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 3778946 |
|---|
| End bp | 3781750 |
|---|
| Gene Length | 2805 bp |
|---|
| Protein Length | 934 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643586746 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_002484452 |
|---|
| Protein GI | 220909141 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGTC TCCCCCCCAC CGCCTTTCAC CGTTATGCCG TCGCCATCGT GCTCGTAGGG
GTGTCCCTTG TCTTCATGCT CCTGCTTGAT CCCTTCATCG GCATGACCAG CACCCCTTTT
CTGCTCTTTT TTGGGGCCCT GACGATCAGT GCCTGGTATG GGGGTAGAGG GGCAGGTATT
CTGGCCACCC TCCTCTCAGC CCTGCTGTCC GAGTACTTCT TTATCCAACC CCAGCATCCG
TTTGGATTTG GTCTGCACTT TAATGATTCT TTACGCACTG TCCTGTTCAT TCTGCAGGGA
CTGTTGATCA GCCACCTGTG TGGAGCCCTG CGGCTGGCTC AGGATCGGAC CCGAACAACA
CTGGAGCAAT TACAAGCCAA CGAAACCCGT TTCCGCAGGC TGGTGGACTC TAACATCATC
GGTGTGGTGG GCTGTGACAT CAAGGGAGCG ATTACCTCCG CCAATGACGA ATTTCTGCGC
ATGACTGGCT TCAGCCGTGC AGATGTGCTG GCCGGCCGGG TGCGCTGGGA TGAAATGACC
CCTGCAGACC TGAAGCCGCT GGATGAGCCA GCCATGGAAG AATTACTCAG CAAAGGCAAA
AATACAGCCT ACGAAAAAGC GTTGATCGGC AAAGACGGAC GACGGGTGCC GGTGGTGGTG
GGAGCGGCTC TCTTGCGCAA TGATCCAGAA AGTGTCATCA GCTTTGTGCT GGATTTAACC
CGACTGCGGC TCACTGAACA ACGGTTAACG GTACAGTATG CGGTCACACG GGTATTGGCA
GAAGCGGTAA CGGTGCGGGA GTCTGTTGCC CCAATTCTAC AAGCCCTCTG CCAAAGCCTG
GACTGGGAGT TTGCCATCAT CTGGACCGTG GATCAGCAGG CTGGGGTATT GCGCTATCTG
GAAAGCTGGC CGACAGACAC CCTCCTCCTG GACGAATTCC GTTCCCTCAA ACAACCGATC
ACCTTTACCC CCGGTATGGG TCTTCCTGGC CGGATCTGGG CAACGGGACA ACCGGCCTGG
ATTGAATGTT TAGCCACCGA CCCCAATTTT CCCAGGGCAG CAGCAGCGCA AAGAGCCGGG
CTGCAATCGG CCATGGGCTT CCCGATCCGC CTGGACGATC AGGTGCTGGG GGTGATTGAG
GGTTTCAGTA CCCATGGGCG GCCACCGGAT CAGGATTTAT TGCAACTGAT GGGAGCGATC
GGCAGCCAGA TTGGCCAGTT TATGGAACGC AAGCGGGCAG AGGAATCCCT GCGGCAAAGC
CAGGCTCTTT TCGATCGCTT TATGAGCCAC ACTCCGGTTG CCGCCTGGAT TGTCGATCAA
GCCAGCCGCA TTGTCTATCT CAACCCCACC TATTTTCGCC TGTTTAATTT TCCAGCTCAG
GATGCGATTG GCAAAACCGT TGCAGAACTC TACCCCCCTC AATTTGCGGA ACAATTCCTC
CAGAACAATC GCCCTGTTTT CACTCACCAG GAAGTGGTGG AGACGATCGA GACAGCCCCC
CGGACGGACG GCAGTACGGG TGAATTTCTG GTCTACAAGT TCCCCATTCC CCAGGAACCC
GACGAATTGC TGCTGGGAGG GGTGGCCCTG GACATCACCG AGCGAAAACA AGCCGAAGCC
GAACGAGAAC GCCTGTTGCA ACGGGAACAG GAAGCACGGG AGCAGGCAGA ATCCGCCAAC
CGGATCAAAG ATGAATTTTT AGCCGTACTC TCCCACGAAC TGCGATCGCC CCTCAACCCC
ATCCTCGGCT GGGCCAAGCT CCTGCAAACC CGCCCCTTTG CCCCTGAGAA GGCCCAACAA
GCCCTACAGA CGATCGAACG CAATGCCAAA CTCCAGGCCC AACTGATCGA AGACCTGCTG
GATGTTTCCC GGATTCTGCG CGGCAAAATG GTCTTGAATG TCTGTCCGGT CGATCTGGTC
ACAGTGATCG AGGCCGCCTT AGAAACCGTT CAGCTATCTG CAGAAGCCAA AGGAATTCAG
CTCGAAAGAC ATCTCGCAAA CGACATCGGT TTTATTTCCG GGGATGCCGG ACGGCTGCAA
CAGATCGTCT GGAATTTGCT GTCCAATGCG ATCAAATTTA GCCCACCGGG CCATCGGGTT
GATATCCGGC TGGAGCGGGT CGGGGCTGAA GCGCAAATGC AGGTTCGGGA TACCGGCAAG
GGAATTAACC CGTCCTTTCT CCCCCATGTG TTTGAGTACT TTCGCCAGGA AGATAGCAGA
ACGACGCGCA AATTTGGTGG ACTGGGGCTG GGGTTGGCGA TCGTTCGTTA CCTGACTGAA
CTGCATGGGG GAACAGTCCA AGCCGAAAGC GGGGGGGAAG GCCAGGGTGC AACCTTCAAG
GTGCGGCTAC CCCTGCTCAA AGTGGGTCAC AGCAGTGAAG AACGTTCTGT ATCTCCCCCA
TCGCCAACCT CGCGACTGAG GGGGTTACGC ATCTTAGCGG TGGATGATGA GGCCGATATG
CGCGACCTGC TCGTCACCAT GCTGGAAGAT GCCGGAGCAG TGGTCAAAAT CACCGCCTCT
GCCGTCGAAG CCTTAGCAGC TCTGGACTCT TTCCACCCCG ATCTTTTGAT CAGCGATATT
GGCATGGCAG AGGTGGATGG TTACATGTTG CTGCACCAGA TCAGAGGCTT ACCCCCAGAA
CAGGGCGGAC AGATCCCTGC CCTTGCCCTC ACCGCCTATG CCAGAGATGA AGATCGACAA
CAGGTTCTGG CTGCAGGGTT CCAACAACAT TTGCCTAAGC CAATTGAACC GGACACGCTG
GTAGCGGCCG TCGCTGATCT GATCCGACGG TCTCCCACGG GCTAG
|
|---|
| Protein sequence | MIRLPPTAFH RYAVAIVLVG VSLVFMLLLD PFIGMTSTPF LLFFGALTIS AWYGGRGAGI
LATLLSALLS EYFFIQPQHP FGFGLHFNDS LRTVLFILQG LLISHLCGAL RLAQDRTRTT
LEQLQANETR FRRLVDSNII GVVGCDIKGA ITSANDEFLR MTGFSRADVL AGRVRWDEMT
PADLKPLDEP AMEELLSKGK NTAYEKALIG KDGRRVPVVV GAALLRNDPE SVISFVLDLT
RLRLTEQRLT VQYAVTRVLA EAVTVRESVA PILQALCQSL DWEFAIIWTV DQQAGVLRYL
ESWPTDTLLL DEFRSLKQPI TFTPGMGLPG RIWATGQPAW IECLATDPNF PRAAAAQRAG
LQSAMGFPIR LDDQVLGVIE GFSTHGRPPD QDLLQLMGAI GSQIGQFMER KRAEESLRQS
QALFDRFMSH TPVAAWIVDQ ASRIVYLNPT YFRLFNFPAQ DAIGKTVAEL YPPQFAEQFL
QNNRPVFTHQ EVVETIETAP RTDGSTGEFL VYKFPIPQEP DELLLGGVAL DITERKQAEA
ERERLLQREQ EAREQAESAN RIKDEFLAVL SHELRSPLNP ILGWAKLLQT RPFAPEKAQQ
ALQTIERNAK LQAQLIEDLL DVSRILRGKM VLNVCPVDLV TVIEAALETV QLSAEAKGIQ
LERHLANDIG FISGDAGRLQ QIVWNLLSNA IKFSPPGHRV DIRLERVGAE AQMQVRDTGK
GINPSFLPHV FEYFRQEDSR TTRKFGGLGL GLAIVRYLTE LHGGTVQAES GGEGQGATFK
VRLPLLKVGH SSEERSVSPP SPTSRLRGLR ILAVDDEADM RDLLVTMLED AGAVVKITAS
AVEALAALDS FHPDLLISDI GMAEVDGYML LHQIRGLPPE QGGQIPALAL TAYARDEDRQ
QVLAAGFQQH LPKPIEPDTL VAAVADLIRR SPTG
|
|---|
| |