Gene Cyan7425_3744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_3744 
Symbol 
ID7289689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp3730879 
End bp3734346 
Gene Length3468 bp 
Protein Length1155 aa 
Translation table11 
GC content56% 
IMG OID643586718 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_002484424 
Protein GI220909113 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCGG AACAACAGAA GCGTATCTTA GGCTACTTTA TTGAGGAAGC CAAGGAACAC 
CTCCAGACGA TCGAGCACAG CCTGCTTAAT TTGCAAGGGG TTGTGGAGGA TTCAGACATG
CTGGATGAGG TTTTCCGGGC CGCCCACTCC GTCAAGGGGG GAGCAGCGAT GCTGGGGATC
TACAGCATTC AGCACATCGC CCATAAACTG GAGGACTATT TTAAAATCCT GAAAGAGCAT
CCCATTCAGG TGGATCAGCA GTTGGAAGCT CTGTTTCTGC AAAGTTTTGA TGGGCTGAGT
GAGCTGGTTG AGGAACTTCA AGGTCCTTTT GGTTTAGGGG ATGATGTGGC TGAAGCGGCC
CTGCGGCAGT TGGAACCCGT CTTTACGCAA TTACAGGGCC ACCTCAATGG TTTAGTCGGT
CAATCGCCGA CCGAAGTGGA AACGCCTCAG CCCGAACTTC AGCCCGTAGG CAGAACCGCA
GCACCTGCAC CACAACCCGC TTTGGCTGCC TTTACTACAG AGGTTCCCCA ATACTTGCGG
CAGATGCTGG AACTGTTTAA GCAGGGGGAT ACTCCCGTCT GTCGTCAGCA GTTGAGGGAA
ATGTGCTTCA GCTTGGCTCG CCTGGCAGAA CCCGATCAAC TCCCTGGCTG GTCAAACTTG
TTGTCCCTCG TGGATCAAGT GATTGCCCAT CCAGAAAATT CCTTTGTCGC CATGGCTGCC
CCTGTGATCC GGGAGATCAA AACCGCACAG GAGCAAATTT TGAGGGGAGA AACCGACTTT
TCCTCCAGCC CCCAGTTTCT GGCTCTTGTG CCTGTCGAAC CAGTACCAGT CGCCGGAACT
CAGCCGGATG AGCTTTCCGA AAGTCTGAGT GATCTCTTCG CTGCATCTCC CTGGGAGGAG
GAGCCATCTG CCGCCAGTCG CCACGAAACT CCCTTGGAGC AAGAGCAGCC TGGGGACTAC
GATGCCAATA TTGCTGAACT GTTGTGGGTT GAGCGTGAAT CTTCCCTGTC TGAGGAGGCA
GTGGAATTAT CCCGCTTCTT TGCCGATGGC AGTGCTCTTG AATCTAATCC AGATTTGCTC
TTTGAGGAAG CTTCCGCCCT ATCCGATGTC ACCAGTCTGT CTGAACCCCT GGCCGCTGAC
TCCCCCGATC TGGACCTGGC TGACCTCTTC AGCTCCTTTG CCGTTGAGGA TAATGCTGTT
GATACCTTTT TGCAAGACTT ACTGGACGAT AGAGAAAATG CCGTCGTAGG GGAGCAGACG
GGTCGGCAAC AACCTCCGAT CGCCGATCCT TTGGCAGAAA CGAAGACTGA CGTAGCACCA
GAGCCGATCA GTGCCGACCA TTTTGCTGAT CTGGAAGCTC TGCTGGAACC CGCTCCGTCC
GCTGCTGCCC CAGCAAATCT GCAACCAGCG GCCAACTTTC AGGACATGGA GCAACTGCTG
GAGGAAAGTA ATCGCAGCCT CAACCCCACG GCAGCCCCTA CCCGCTCCTT TCAGCCCAAG
GGCCGCCCTG CCCGCCGCGC CACCACCTCT GGTTTTGAGC AAACGATGAA AGTGCCTGTG
CGGCAATTGG ATATCCTCAG TAACCTGGTG GGAGAACTGG TGGTGAACCG CAATAGCCTG
GAAGGCAACC AGGAGAAATT ACGCCAGTTT CTGGATAACC TCCTCTACCA GGTGCAGCAA
CTGAGTGACG CTAGCCAACA GATGCAGGAG CTATACGAGC GATCGCTGTT GGAAAGTTCG
CTGCTCTCAG CTACTGGGGT TCGTCCCGCC CTGGTCGGGA ATGGGTCATC GCTCCCTGAT
TCCAGACACG CCACTGGGGC CAGCTTTGAT GCCCTGGAAA TGGATCGGTT CACCGGTTTC
CACACTCTTT CTCAGGAAAT TATTGAGCGG ATTGTCCGGG TGCGGGAAGC AGCCTCCGAC
ATTGAGTTTG TCGTTGATGT CTCAGAACAG GTCACCCGCA CACTACGACA GGTTACGACC
CAGGTGCAGG AAGGACTCAG CCGTTCCCGG ATGATTCCCT TTGCCCAAAT TGCCGATCGA
CTTCCCCGGG CTGTTCGGGA TCTATCGCTC AAGTGTGGCA AGCAGGCCCA GTTGGAGATT
GAGGGGCGCG ACATCCTGGT GGATAAGGGA ATTCTGGAGC GACTTTACGA TCCGCTCACG
CACCTGGTTA ACAATGCCCT GTATCACGGA ATTGAACCCC CAGAAGTGCG CCAGAAGCTA
GGTAAGCCAG GGGAAGGATT GATCAAGGTG CGGGCCTTCT ACCAAGGCAG TCAGACCATT
ATCTCGATTA GTGACGATGG TACAGGGATT GATCAGGAGC GGGTGAAAGC CAAAGCCATT
CAGAAAGGCC TGATCACAGC AGCAACCGCA GAAACCCTCT CTCGTCAGGA TATCTACAAT
CTCCTCTTCC GTTCCGGCTT CAGTACCCAG GATCAGGTGG ATGAACTGGC CGGCCGGGGT
GTGGGGATGG ATGTGGTCCG GGCCAGTCTG GAGGAAATGC GCGGGGTGAT GAACATTGAC
TCCACCCTGG GCAAAGGCAC CACGTTTACG ATCCGCCTTC CTCTTACTCT TAGCATCACC
AAAGCCCTTT GCTGTGTCGA TAACTACTGC CGCATTGCCT TCCCCATCGA CGGGGTGGAG
GACATGGTCG ATGTGGGCAA AGAACGGATT GAGGTTCCTG GGGAGGGAGA AATCCTCTTT
CCCTGGCGCG ATCGCCACTT ACCCTTCCGC CGCCTCTCGG ACCTGCTACC CTATCAACGC
CAGCTCAGCC GGGGTAACAT TTACGCTGGC AGTCAGGATG ATAATGTCAT TTCCGTTGTT
GTTCTCCGCA GTGCCGATGA TTTGATTGCC TTACAGGTCG ATCAGGTGCT GGGAGAAGAG
GAAATCGTGA TTAAGCAACT GAGTGGCCCG GTGCCCAAGC CCGTGGGAAT TGCTGGGGTA
ACGGTTCAGG GGGATGGGCG GGTGATGCCG ATCGCGGATG TTCTGGAATT AATCGATCTG
TCCCTGGGGC GACTGGAAGT GAACCGCAGC CTCTGGGGAA CAGCACTACC AGCGGAACCG
GAAATCGAGA AGACCGAACC CCTGGTGTTG ATCGTGGACG ACTCGATTAC GGTCAGAGAG
CTTTTGTCCA TGACCTTTAC GAAGGTGGGA TACCGGGTGG AACAGGCCCG CGATGGTCAG
GAAGCCTGGG AAAAACTCCG GGCCGGCTTA CCCTGCGATC TGGTGTTCTG TGATATTGAA
ATGCCACGCA TGGACGGGTT GGAACTGCTG TCCCGCATTC AAAAAGATAC GTCCCTCAGT
CATCTGCCGA TCGCCATGCT GACCTCGCGG GGAGCAGAAC GGCACCGGCA CATGGCTGTG
CAGTTGGGAG CCAAGGGTTA CTTTACGAAG CCCTATCTGG AAGAGGCCCT TCTGGATGCT
GCCAACCGCT TGCTGAAGGG TGAAGTGCTG GTGACCCAAA CCGCCTGA
 
Protein sequence
MQPEQQKRIL GYFIEEAKEH LQTIEHSLLN LQGVVEDSDM LDEVFRAAHS VKGGAAMLGI 
YSIQHIAHKL EDYFKILKEH PIQVDQQLEA LFLQSFDGLS ELVEELQGPF GLGDDVAEAA
LRQLEPVFTQ LQGHLNGLVG QSPTEVETPQ PELQPVGRTA APAPQPALAA FTTEVPQYLR
QMLELFKQGD TPVCRQQLRE MCFSLARLAE PDQLPGWSNL LSLVDQVIAH PENSFVAMAA
PVIREIKTAQ EQILRGETDF SSSPQFLALV PVEPVPVAGT QPDELSESLS DLFAASPWEE
EPSAASRHET PLEQEQPGDY DANIAELLWV ERESSLSEEA VELSRFFADG SALESNPDLL
FEEASALSDV TSLSEPLAAD SPDLDLADLF SSFAVEDNAV DTFLQDLLDD RENAVVGEQT
GRQQPPIADP LAETKTDVAP EPISADHFAD LEALLEPAPS AAAPANLQPA ANFQDMEQLL
EESNRSLNPT AAPTRSFQPK GRPARRATTS GFEQTMKVPV RQLDILSNLV GELVVNRNSL
EGNQEKLRQF LDNLLYQVQQ LSDASQQMQE LYERSLLESS LLSATGVRPA LVGNGSSLPD
SRHATGASFD ALEMDRFTGF HTLSQEIIER IVRVREAASD IEFVVDVSEQ VTRTLRQVTT
QVQEGLSRSR MIPFAQIADR LPRAVRDLSL KCGKQAQLEI EGRDILVDKG ILERLYDPLT
HLVNNALYHG IEPPEVRQKL GKPGEGLIKV RAFYQGSQTI ISISDDGTGI DQERVKAKAI
QKGLITAATA ETLSRQDIYN LLFRSGFSTQ DQVDELAGRG VGMDVVRASL EEMRGVMNID
STLGKGTTFT IRLPLTLSIT KALCCVDNYC RIAFPIDGVE DMVDVGKERI EVPGEGEILF
PWRDRHLPFR RLSDLLPYQR QLSRGNIYAG SQDDNVISVV VLRSADDLIA LQVDQVLGEE
EIVIKQLSGP VPKPVGIAGV TVQGDGRVMP IADVLELIDL SLGRLEVNRS LWGTALPAEP
EIEKTEPLVL IVDDSITVRE LLSMTFTKVG YRVEQARDGQ EAWEKLRAGL PCDLVFCDIE
MPRMDGLELL SRIQKDTSLS HLPIAMLTSR GAERHRHMAV QLGAKGYFTK PYLEEALLDA
ANRLLKGEVL VTQTA