Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_3662 |
Symbol | |
ID | 7289606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 3638102 |
End bp | 3640630 |
Gene Length | 2529 bp |
Protein Length | 842 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643586637 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_002484343 |
Protein GI | 220909032 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.223359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATACTA AAGAGCGACA ACAGGTTCGC CATTTGCTTG TTATTAAAGA TGACGGGGGG CGCAGAACCG TACCCCTGGA AGCTGCCACC TATTCTCTCG GTCGCCATGC CAGTAATTCG ATTGTTTGCC ATTCACCCCA TGTCTCCCGT CAACATGCCT TACTGCTGAG AATGACCGAT CCCGAGACTG GAAACTTTTT CTTTCGGATT GTTGATGGTA ATTTACAGGG CAAACGTAGC ATCAATGGCA TCACTGTCAA TGGCAAACGA TGTGCTTCCC ATAACCTCAA GCATGGGGAT TTGATTGTCC TGGGAGGAGA TATTAAGGCT CGATATCATG TAATTTCTAA TGTTTCCGAT ACCGGGTTCC GGCGTTACTC CGAGGAAGTG CAGGGCTCCA GTTTACCCAC AACAACTGAC ACGGGGTTAG GATTCCAACC AATTACCCCC AGTAGTAAGG AACTGAGCAA TCTGAGCGAG GCCGCTTTGA TCCGGCTCTC CTCTTTTCCA GAAATGAACC CGAATCCGAT TCTGGAGGTT GATCTCGACG GCAAAATTAC CTACCTGAAC CCGGCGGCGG TGCAACAGTT TCCTGAATTG AAACACAATA GGTCCCACCC TCTCCTGCAA GGGCTGGCAG AATTGGGACA GGATGAAGAG CAAAAATACC TGGTGCGGGA GTTAGAGGTA GACGGTCGCA TCTATGAACA GACGGTTCAT TCTATCTCTG AAAGCCATCT GGTTCGCTGT TACATGGTAG ATATTACCCA GCGCAAATTA ACCGAGCAAG CCCTGAGAGA AAGTGAAGAA CGCTATGCTG CGGCTGCTAG GGGTGCCAAC GATGGCCTGT GGGACTGGGA TCTGCGCACC AATCAAATTT ATTTCTCGCC CCGCTGGAAG CTGATTCTGG GCTGGCACGA AGATGAGATT GGCAAGAATC CAGAGGAGTG GTTCGATCGC ATCCACCATG AAGACCGGGA ACGGGTGAAA GCCGAGCTGC ATTATCACCT GAATGGCTCT AAGGCCCATT TTGAGAGTGA GCATCGCCTG CTGCATCGAG ATGGCAGTTA CCGTTGGGTG CGTAGTCGTG GCCTGGCCTT GTGTGATGAG GACGCCATCC CCTATCGGAT TGCCGGTTCC CTGACCGATA TCACGGCCTA CCGCCTGGCC CAGGAACAAA TTCTGCACGA TGCCCTCCAC GATGCCTTAA CCGGTTTGCC GAATCGGGTT TTGCTGCTGG ATCGGTTAGC TCAGGCGATT CATCGGGGCC GTCGCCGTTC CGACTATCAG TTTGCGGTCT TATTTCTTGA CCTGGATCGG TTCAAGGTGA TCAATGACAG CCTGGGACAC ATGGCTGGGG ATCGGCTGCT GGTGGAAATT GCCCAGCGGT TGCAACTATG CCTGCGCTCA GAAGATACGA TTGCCCGGCT GGGGGGAGAT GAGTTTGCCA TTCTGGTGGA GGATATTCAG AGCGTTGAGG CTGTGCTCCA GCTAGTCGAG CAGCTCCATG CCGAACTGAA CCGTCCCCTT AGTCTGGATA ATCAGGATAT TTTTACAACC GCCAGCATTG GGATTGCGTT CAACAGCCCC CAAACGGAAC AGCCGGAAGA ACTGCTCCGC GATGCAGATG TGGCCATGTA CCGGGCTAAA TCCCTGGGGA AAAACCGCCA TGAAATTTTC AGTGCCGGGA TGCGCCTGGA AGCGATCGCC CAACTGCAGG TGGAAACAGA ATTGCGGCAC GCTTTAGAAC GACAGGAACT GCGGGTTTTC TATCAGCCGA TTATCCAGTT GAACGAAGGG ACTCTGTACG GCTTTGAAAC CCTGGTGCGT TGGGAACACC CTCAACGGGG TTTGGTGTTG CCCTTAGAGT TTCTGCCGAT CGCCGAGGAA ACGGGTTTAA TTGTACCGAT CAGCTGGTGG GTGTTGCAGC AGGCCTGTGA ACAGATGCAA GCCTGGCAAC AACAATTCCC CTGCAGTCAG TTCCTCAATA TCAGTGTCAA CTTTACTCCC CAGCACTTTG CCCAACCCAG CTTTCTGCAA AAGTTAAATC GCATTCTGGC GGAAACCGGT TTCCCCCCCC ATCGGCTGCG GTTGGAAGTC ACTGAAAATT TATTTATGAA AAGTACCGAA ACGACCATTG ATATTTTGCA GGAGTTGCAG GACTGGGGGA TACAGATTTA TCTAGATGAC TTTGGCACCG GGTATTCCTC CCTCAACTAT CTGCACCGTT TTCCGATTAA CACCCTGAAG ATCGATCGCT GCTTTATTGG CCATCTCAAC AGCAATGGTA GCCATGCCAG TATTGTCCAG GCGATCATGA CGCTAGCCCA CGTTTTAGGA TTGGCAGTGA TTGCCGAGGG AGTGGAAACC GTGGAACAGT TAAACCAGCT GTGTCAACTC CAGTGCGAGT TCGGCCAGGG CTATTTGTTC AGCTTGCCCC TCAGCCAGAC CCAGATTGCT GAATATCTGG CCAAAAATGA TTTAGCCTGG CACAATGACT ATTACTCAGG GAATAGAATT GTACGGTAA
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Protein sequence | MNTKERQQVR HLLVIKDDGG RRTVPLEAAT YSLGRHASNS IVCHSPHVSR QHALLLRMTD PETGNFFFRI VDGNLQGKRS INGITVNGKR CASHNLKHGD LIVLGGDIKA RYHVISNVSD TGFRRYSEEV QGSSLPTTTD TGLGFQPITP SSKELSNLSE AALIRLSSFP EMNPNPILEV DLDGKITYLN PAAVQQFPEL KHNRSHPLLQ GLAELGQDEE QKYLVRELEV DGRIYEQTVH SISESHLVRC YMVDITQRKL TEQALRESEE RYAAAARGAN DGLWDWDLRT NQIYFSPRWK LILGWHEDEI GKNPEEWFDR IHHEDRERVK AELHYHLNGS KAHFESEHRL LHRDGSYRWV RSRGLALCDE DAIPYRIAGS LTDITAYRLA QEQILHDALH DALTGLPNRV LLLDRLAQAI HRGRRRSDYQ FAVLFLDLDR FKVINDSLGH MAGDRLLVEI AQRLQLCLRS EDTIARLGGD EFAILVEDIQ SVEAVLQLVE QLHAELNRPL SLDNQDIFTT ASIGIAFNSP QTEQPEELLR DADVAMYRAK SLGKNRHEIF SAGMRLEAIA QLQVETELRH ALERQELRVF YQPIIQLNEG TLYGFETLVR WEHPQRGLVL PLEFLPIAEE TGLIVPISWW VLQQACEQMQ AWQQQFPCSQ FLNISVNFTP QHFAQPSFLQ KLNRILAETG FPPHRLRLEV TENLFMKSTE TTIDILQELQ DWGIQIYLDD FGTGYSSLNY LHRFPINTLK IDRCFIGHLN SNGSHASIVQ AIMTLAHVLG LAVIAEGVET VEQLNQLCQL QCEFGQGYLF SLPLSQTQIA EYLAKNDLAW HNDYYSGNRI VR
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