| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3658 |
|---|
| Symbol | secA |
|---|
| ID | 7289602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 3633663 |
|---|
| End bp | 3636461 |
|---|
| Gene Length | 2799 bp |
|---|
| Protein Length | 932 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643586633 |
|---|
| Product | preprotein translocase subunit SecA |
|---|
| Protein accession | YP_002484339 |
|---|
| Protein GI | 220909028 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
|---|
| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAAA CCCTTCTGGG CGATCCTAAC AAGCGCAAGC TGAAAAAATA CCAGCCCGAT
GTTGTGGAAA TTAACCTGCT GGAACCAGAA ATGCAGGCCC TCAGTGATCA GGAGTTGCAG
AGTAAAACCG GGGAATTCAA ACGCCAACTG GAGCAGGGAA AATCCCTGGA TGAGTTGCTA
CCGGAAGCCT TTGCTGTTGT AAGGGAAGCC TCCCGCCGCG TGCTGGGATT ACGCCATTTT
GATGTGCAGT TGCTCGGTGG GATGATTCTC CATGATGGGC AGATTGCTGA AATGAAAACG
GGGGAAGGCA AAACTCTGGT TTCTACCCTG CCCGCCTATC TGAATGCGCT CACGGGTAAA
GGGGTGCAGA TCATCACTGT GAACGACTAT CTGGCCCGCC GGGACGCGGA ATGGATGGGA
CAAGTTCACC GCTTTCTGGG GCTGAGTGTG GGGTTAATTC AGCAGTCGAT GCCTCCACAG
GAGCGCCAGA AAAACTATGC CTGTGACATT ACCTACGCGA CCAACAGCGA GATTGGCTTT
GACTACCTGC GGGACAATAT GGCTACTTCC ATGGCAGAAG TGGTGTTACG TCCTTTTCAT
TACTGCGTCA TCGACGAAGT GGACTCGGTC TTGATCGATG AAGCCCGCAC CCCGCTGATT
ATTTCCGGGC AGGTGGAACG GCCCACCGAA AAGTACCTGC GGGCCACGGC GATCGCGGAT
GCCTTGCAGA AAGAAGAACA CTACGAAGTG GATGAAAAAG CCCGCAACAT TTTGCTGACG
GATGAGGGGT TTATTGAGGC AGAAAAACTC CTGGGGGTAA AAGACCTGTT CGATTCCCAG
GACCCCTGGG CCCACTACAT CTTTAATGCA GTGAAAGCGA AAGAACTGTT TATTAAGGAT
GTGAACTATA TTATCCGCGG TGGCGAAATT GTGATTGTGG ATGAGTTCAC GGGGCGGGTG
ATGCCGGGTC GGCGCTGGAG TGATGGCCTG CACCAGGCGA TCGAAGCGAA GGAAGGGCTG
GACATTCAGA ATGAATCCCA AACCCTGGCT ACGATTACCT ATCAAAACCT GTTTTTGCTC
TATCCCAAAC TGGCTGGCAT GACCGGAACC GCCAAGACGG AAGAAGCTGA GTTTGAGAAA
ATTTATAAGC TAGAAGTGAC GGTTGTTCCC ACCAACCGGG CGACGGGGCG ACGGGATCTG
CCGGATGTGG TCTACAAGAA CGAAATGGCC AAATGGCGAG CGGTGGCGGC GGAATGCGCG
GAGTTTCACC AGGCGGGTCG GCCGGTACTG GTTGGAACCA CCAGCGTGGA GAAATCGGAA
GTGCTTTCCC AACTCCTGAA CCAGGCCGGT ATTCCCCACA ATCTCCTCAA TGCCAAACCA
GAGAACGTGG AGCGGGAGTC GGAAATTGTT GCCCAGGCGG GTCGCAAAGG GGCCGTGACG
ATCGCCACCA ACATGGCAGG TCGAGGAACG GATATTATTT TGGGGGGGAA CGCCGACTAC
ATGGCCCGGT TAAAGGTGCG GGAATACTTC ATGCCCCGAA TTGTCATGCC CGAATCCGAT
GATCCCCTGG CGATGATGCG GATCATGATG GGGGATGGCA ATGCCTCCGG TGGTCAGGGG
TTTGCCCCTC AGGGAAACCG GCCGCAAAAA ACTTGGAAAG CGTCGCCCAA CATTTTCCCC
ACCAAGCTGT CACGGGAAAC GGAACAATTG CTCAAGGCGG CAGTGGATTT TGCGGTCAAA
CAGTACGGAG AACGCAGTAT ACCTGAACTT CAAGCCGAGG ACATTGTCGC GATCGCCTCA
GAAAAAGCAC CCACAGAAGA TCCAGTCGTT CAACGCCTGC GGGAAGCCTA TAATCAGATC
CGCAGCGAGT ATGAAACCTT CACCCACCAG GAACACGATG AAGTTGTGCA GTTCGGCGGG
TTGCATGTGA TCGGCACCGA GCGGCACGAA TCCCGGCGGG TGGATAACCA GTTGCGGGGA
CGGGCTGGCC GGCAGGGAGA CCCTGGATCA ACCCGATTTT TCTTAAGCCT GGAAGATAAT
CTGCTACGGA TTTTTGGCGG CGATCGGGTG GCCGGGCTGA TGAACGCCTT CCGGGTGGAA
GAAGATATGC CGATCGAATC CCGCATCCTC ACGGGCAGCC TGGAGAACGC CCAGCGCAAA
GTTGAAACCT ACTACTACGA CATCCGTAAA CAGGTGTTTG AGTATGACGA TGTGATGAAC
AACCAGCGGC GGGCCATTTA TGCGGAACGG CGCCGGGTGC TGGAAGGGGA AGACCTGAAG
GAGCGGGTGC TAGAGTATGC TGAGCGTACC ATGGATGATA TCGTGGAAGC CTACGTCAAC
CCGGATTTAC CGCCGGAAGA GTGGGATCTA AACAGCATGG TTGGCAAGGT GAAAGAATTT
GTCAATTTGC TGGCGGATCT GGAACCGCAA CAACTGGAGG ACCTGTCGAT GGCAGAAATG
CAAATGTTCC TCCATGAACA AGTGCGGATT GCCTACGATC GCAAAGAAGC CGAAATTGAC
CAGTTGCAAC CGGGACTGAT GCGGCAGGCG GAACGGTTCT TTATTCTTCA ACAAATCGAT
ACCCTCTGGC GGGAGCACCT GCAAGCCATG GATGCTCTGC GGGAATCCGT TGGGTTAAGG
GGCTATGGCC AGCAAGATCC CCTGGTGGAA TACAAGAGTG AAGGCTACGA ACTGTTCCTG
GATATGATGA CAGCGATCCG GCGCAATGTG GTTTACTCCC TCTTCCAGTT CCAACCCCAG
TACCAGCCGC CGGAAGAAAT GCCCTCAGAG GTGGTTTAG
|
|---|
| Protein sequence | MLKTLLGDPN KRKLKKYQPD VVEINLLEPE MQALSDQELQ SKTGEFKRQL EQGKSLDELL
PEAFAVVREA SRRVLGLRHF DVQLLGGMIL HDGQIAEMKT GEGKTLVSTL PAYLNALTGK
GVQIITVNDY LARRDAEWMG QVHRFLGLSV GLIQQSMPPQ ERQKNYACDI TYATNSEIGF
DYLRDNMATS MAEVVLRPFH YCVIDEVDSV LIDEARTPLI ISGQVERPTE KYLRATAIAD
ALQKEEHYEV DEKARNILLT DEGFIEAEKL LGVKDLFDSQ DPWAHYIFNA VKAKELFIKD
VNYIIRGGEI VIVDEFTGRV MPGRRWSDGL HQAIEAKEGL DIQNESQTLA TITYQNLFLL
YPKLAGMTGT AKTEEAEFEK IYKLEVTVVP TNRATGRRDL PDVVYKNEMA KWRAVAAECA
EFHQAGRPVL VGTTSVEKSE VLSQLLNQAG IPHNLLNAKP ENVERESEIV AQAGRKGAVT
IATNMAGRGT DIILGGNADY MARLKVREYF MPRIVMPESD DPLAMMRIMM GDGNASGGQG
FAPQGNRPQK TWKASPNIFP TKLSRETEQL LKAAVDFAVK QYGERSIPEL QAEDIVAIAS
EKAPTEDPVV QRLREAYNQI RSEYETFTHQ EHDEVVQFGG LHVIGTERHE SRRVDNQLRG
RAGRQGDPGS TRFFLSLEDN LLRIFGGDRV AGLMNAFRVE EDMPIESRIL TGSLENAQRK
VETYYYDIRK QVFEYDDVMN NQRRAIYAER RRVLEGEDLK ERVLEYAERT MDDIVEAYVN
PDLPPEEWDL NSMVGKVKEF VNLLADLEPQ QLEDLSMAEM QMFLHEQVRI AYDRKEAEID
QLQPGLMRQA ERFFILQQID TLWREHLQAM DALRESVGLR GYGQQDPLVE YKSEGYELFL
DMMTAIRRNV VYSLFQFQPQ YQPPEEMPSE VV
|
|---|
| |