| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3648 |
|---|
| Symbol | |
|---|
| ID | 7289592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 3622315 |
|---|
| End bp | 3624183 |
|---|
| Gene Length | 1869 bp |
|---|
| Protein Length | 622 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643586623 |
|---|
| Product | Carbohydrate-selective porin OprB |
|---|
| Protein accession | YP_002484329 |
|---|
| Protein GI | 220909018 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000847402 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TACTGATGCT GGGCGGTTCA CTAACTGTTC TAGCTTTACC ACAATCTGCC
TGGGCCACTG GTCTCGAGCT TTCTGCTTCT CCTCTGACTC CCACCCCAGA TGTTTCTCTC
CCAGCTAGTC CGGTTAATCC CCCCGACCTT CTGGCTCAAA CCCCGACTGC TCCGGTCAGT
GATATTGCCT CGCTTCAAGC TGGAAGTAAT CCGGTCAAAC CTGCTCCCGC AACGAACGTC
AATTCTGTTT CTAATTTGCT GCTGGAAGCG GAACGGGGAT CTGCTCCTCA AGTCACCTCT
GTTTCGCAAC TCTCTGATGT GCGGCCAACG GACTGGGCTT TTCAGGCCTT ACAGTCTCTG
GTAGAGAAGT ATGGTTGTAT TGCTGGGTAT CCAGATGGGA CATTTCGTGG GAATCGCGCG
GCTACGCGGT TTGAACTGGC TGCTGCTTTG AACGCCTGTT TGGATGTCAT TTCCGATCGC
TTTGCGACTA AAGAAGACCT GGCCACAGTT CGCAAGTTGC AAGAGGAACT GGCTGCGGAA
CTGGCCACGC TACGTGGACG AGTCGATGGT TTAGAAGCCC GCACCGCCAA ACTGGAAGCC
CAGCAATTCT CCACGACGAC CAAGCTCTCC GGGGAAGCCA TCTTCCAGGC GACTCAGTAT
GCCAGTGGCG ATCGACCTGT ACCAGCCGGG TTCCCCCAGG GCTTCAATGG GGATGTGGGA
GACAATTTGT TTGTTAATGG CCGGTCTACC CTGAACCTCC TGACCAGTTT CTCCGGTAAG
GATCTACTGA TCACCAGCCT GCAAGCCGGT AATTATCCAA CCAATACCAC TGGTCTTCCG
GCGGGTTTTC CGGGTACTCT GGCACCCCAG GTTACTCAGG TGGGTTCCAA CAACACCTTC
AGCCTCTATA CACTGCAATA TCGCTTTCCC GTCCTAAATG ACAAAGTGAC GATCATCGCG
ACTGCCATTG GTGGAGAGCT AGCAGATTTT GTTGATACGC TTAACCCGCT TGACTCCGAT
GGACAGGGTG CCCTTTCTGC CTTTGGATTG CGTAACCCGA TTTACCGGCA GATTACTCGA
TTTGTCAATC CTAACTTCTC GGCTGCTGGT GCTGGTTTTT CAGCGGACAT TACTGACCAA
ATTAGCTTTG CTGGGGGCTA TCTTGTTCCC CTCTACAGTG CTTCAAATCC TTTGCCACAA
GTGGGCCAGC CCGCTCCTAT CCCCAGTGGA GGTGGTCTGA CCGCAGGCGA CTATGCGGCG
ATCGCTCAGC TTACGTTCAG ACCGCTTAAA TCTCTCGGAT TCGGGTTGAC TTATGTTCGC
TCTTACACCC AATCTCCTTT CTTTGGCATG TCCTTTGCGG GCTACACTGG TTCTACCCGT
GCCCAAACTG GTTTAAGCAG TTTCCTCAGC CCCGCTGCTG TTGTCCCAAC TTCGGCAAAC
TCAGGTGGCT TTGAGTTTTC CTGGAATGCT CATCGGCGAG TCATCGTCTC CGGTTGGGTT
GGGGCTTCCT TTACTGAGGC TGAAGACAAC GGTGGGTTTA CGGTTGACAA TGAAGGGTTT
TTCAGACCGA TTAACCGTGG CGATACGTCA ACGGTTCTCA ACTATGCCCT TACCTTCGCC
TTCCCAGATC TGTTCTTAAA AGGCAGTATG GGCGGTTTGG TGCTGGGTTC TCAACCCCAG
GTCATTGCTA GTAGCATCAA TAACAACACC GACCCGGATA TGAACTTCCA CGTTGAAGGC
TTCTACCGCT TGCAGGTCAA TGACAACATC TCAATTACAC CTGGTGTGTT TGCGGTGTTC
AATCCTGAGG GAAATAGCCA GAACGATACC GTTGTGGTCG GAACGATTCG GACAACCTTC
ACGTTCTAG
|
|---|
| Protein sequence | MKKILMLGGS LTVLALPQSA WATGLELSAS PLTPTPDVSL PASPVNPPDL LAQTPTAPVS
DIASLQAGSN PVKPAPATNV NSVSNLLLEA ERGSAPQVTS VSQLSDVRPT DWAFQALQSL
VEKYGCIAGY PDGTFRGNRA ATRFELAAAL NACLDVISDR FATKEDLATV RKLQEELAAE
LATLRGRVDG LEARTAKLEA QQFSTTTKLS GEAIFQATQY ASGDRPVPAG FPQGFNGDVG
DNLFVNGRST LNLLTSFSGK DLLITSLQAG NYPTNTTGLP AGFPGTLAPQ VTQVGSNNTF
SLYTLQYRFP VLNDKVTIIA TAIGGELADF VDTLNPLDSD GQGALSAFGL RNPIYRQITR
FVNPNFSAAG AGFSADITDQ ISFAGGYLVP LYSASNPLPQ VGQPAPIPSG GGLTAGDYAA
IAQLTFRPLK SLGFGLTYVR SYTQSPFFGM SFAGYTGSTR AQTGLSSFLS PAAVVPTSAN
SGGFEFSWNA HRRVIVSGWV GASFTEAEDN GGFTVDNEGF FRPINRGDTS TVLNYALTFA
FPDLFLKGSM GGLVLGSQPQ VIASSINNNT DPDMNFHVEG FYRLQVNDNI SITPGVFAVF
NPEGNSQNDT VVVGTIRTTF TF
|
|---|
| |