Gene Cyan7425_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_3643 
Symbol 
ID7289587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp3616562 
End bp3617440 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content53% 
IMG OID643586618 
ProductRNA binding S1 domain protein 
Protein accessionYP_002484324 
Protein GI220909013 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.686885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAGTT TTTCTCACGA CGATTTTTTA CGCGCCCTGG AACAACACGG CTACAGCTTT 
GAGGTCGGGC AGACGGTTCG CGGTAAGGTG GTCAATCTGG ACAGTGATGG AGCCTATATC
GATATTGGTG GCAAATCCAC GGCTTTTCTG CCTGCCCATG AAGTTCTGGT TCCCCCTGGC
AAGAAGCTGG CGGATGTTTT ACCTTTACGC AGCGATCGCG ACTTTCTGAT CATTCGGGGT
CAGGATGCGG AGGGACAGAT TTCCCTATCG CTAAAACGGT TGGAAATTAA GGCCCTATGG
GAACGCTATC AGTCTCTGCA GGAAAGCCAG GGGGCGATCG ACGTGCGGGT GACGGGAGTG
AACAAAGGTG GCTTAACCGT GGATGCTAAG GGGATTCGCG GCTTTATTCC TCGCACCCAT
GTCGTTGGGG CAGAAACTCT GGAAAGTTTG GTGGGTCAAA CTCTAACGGT GACCATTCTG
GAAGCTGATC CGGAACGGAA ACGGCTGGTT TGCTCCCAAA AAATTGCTCG TCGTCAACAA
CGGTTGCAGG AATTTGATTA TGGCCAACTG GTGCAGGGAA CGGTGCGGGA TATTCGTCCC
TATGGCTTGA TGATCGACCT GACGGGGGTA CTGGGATTAC TGCATATCAA TGATTTCAGC
GAGAAGCGGG TGGGTAGCTT ACAGGCCCAT GTCCAGGTAG GAACCCCGAT TAAGGCGATC
GTCACCAATC TGGATGCCGA ACGGGGGCGA ATTTCTCTGT CCACTCGCTT GCTGGAAAAT
CGGCCAGGGG AAATGCTGGA TGCCTTTGAC CATGTGATGG CAGAAGCCGA AGAACGGGCC
GATCGGATGG CGGCTAAACA GAATCTTCAG GCTGAATAA
 
Protein sequence
MTSFSHDDFL RALEQHGYSF EVGQTVRGKV VNLDSDGAYI DIGGKSTAFL PAHEVLVPPG 
KKLADVLPLR SDRDFLIIRG QDAEGQISLS LKRLEIKALW ERYQSLQESQ GAIDVRVTGV
NKGGLTVDAK GIRGFIPRTH VVGAETLESL VGQTLTVTIL EADPERKRLV CSQKIARRQQ
RLQEFDYGQL VQGTVRDIRP YGLMIDLTGV LGLLHINDFS EKRVGSLQAH VQVGTPIKAI
VTNLDAERGR ISLSTRLLEN RPGEMLDAFD HVMAEAEERA DRMAAKQNLQ AE