Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_3561 |
Symbol | |
ID | 7289503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 3516460 |
End bp | 3519615 |
Gene Length | 3156 bp |
Protein Length | 1051 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643586535 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
Protein accession | YP_002484243 |
Protein GI | 220908932 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0205417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.226343 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAGAC AGCACCGTTC GCCTGTTGAA CAGATTTCTC CAGAGGACTG GGAGAATACG CCAGCAAGTG TCAAGCGACT GGTAGACGTC CTTCTAAGCA GTTCTACTGC AGCAGGGCAG GAAAGCCATT TGATTCAATT TTTGGATGCC ACCCCCATTG GGATTGCTGT CCATGATGCC ACCGGCCAAC TGACTTATAT CAACCAGGCA GGTCAGACTA TCCTAAGCAT CGATCGCGCC TATCAAGTGA GTACTGACCA ACTCTCAGAA GTCTTCCAGG TTTACCGTCA GGGGACTCAA AAACTTTACC CGGCTGAATC ATTACCCAGT ACGCTAGCTC TGGCAGGACA AGTAGTGGGA GTTGATGATC TAGAACTGCA TCGTCGTGGT CAGGTTATTC CTCTGGAGGT GTGGGCAAGT CCGATTTTTG ATGCTCAGGG GGAGGTAACG CATACAATTG CGACATTCCA GGATATTAGT GCAAGAAGGC AACTTGAAAC TGAAAGAAAA CGATATGAGC AGGAACAGTT ACAGCGGGAA CAGTCCCTCA ATCGAGTCTT CCAGTCCATT CGGAATTCTC TAGACTTAAA TACTATTTTT ACTACTGCAA CTGAAGAGAC AGCTCAACTT TTAAAACCGC TGAATTGCTT TGTTGTGCAA TATCTACCAG AGCAAGGTAT TTGGCAGCAC GTTGCAGAGT TTAACCATGA GCCGGGTTCC GCAAGCACAA TTGGGCTTGA AATTCCTGAC GCAGATAATC CCTTTGCTGC CCAACTTAAG CAGTTGCAGA CTGTACGGGT AGAGGATACT AGCCAGGTGG ATGACAAAAT CAATCGGGAA CTTGCCCGTG ATACCCCTGG AGCCTGGTTG CTGATTCCTC TTGTAATTGA AGGTCAACTA TGGGGCAGTT TTACAGTAAC AGCAGTCCAA CGGCCTTTTA CCTGGAACCA TAATCAGGTT CAGCTAGCCC AGGCTGTTGC GGCCCAACTA GAAGTTGCGA TTCACCAGGC TAACCTTTAT CAACAGTTGC AGATGGAGTT AGCCGAACGC TGCCAGGCAG AAGCAGCTTT GCGAGAAAGC GAGTCCCGGT TTCAGAATAT TGCAGCAAAT ATCCCAGGTA TCATCTACGG TTACCGCTTT TGCGCGGATG GGTCTGATCA GTTTACCTAC ATCAGCTCTG GGTTCTGTGA GGTGTATGGG TTTGAACCGG ATGAAGCCTT ACAGGACAGC AGTATTATCT GGCAGATGAC CCACCCTGAT GATTTAGAGC GATTAAAGCA ATCTGTTATA GAGTCCTACC AAACCCTACA AAGGTGGCGA TGCCAGTATC GTGTGATGAC CCCGGCTGGA CAACTGAAAT GGCTGGAGGG AGTTTCGCGC CCCACCCGGC AACCGAACGG CGATGTGATT TGGGATGGGT TGATCATTGA CATTAGCGAT CGTAAGCAAG TCGAAGTCGC TCTACAAGAA AGTGAAGCGC GCTATCGCTT GTTAGCTGAG AATATGAACG ACCTTGTCTG TCTGCATGAT TTAGAGGGTC ACTATTTATA TGTCAGCCCG TCCTGTGAAA CTCTTCTGGG CTATCGTCAA GATGAAATGC TGGGGCAGGT TCCTTTCAAC TTCTTTCATC CTGACGATCA AGGTCGAATC TATCAAGAGG CTTTTATACC GGCATTAAGT GGTGAACCTC GGCCGATCAC TTACCGGATG CGTCAAAAAT CTGGCAACTA CATCTGGTTC GAAACCCTAA CAAAACCTAT TTTCGGACAA ACAGGGCAAA TCGTTCAGCT TCAAACCACG TCTCGGGATG TAACGGAGCG GATTCAGGTA CAGGAACAGT TAAAATATGA TGCCCTTCAC GACGCCCTCA CAGGGCTACC TAATCGTTTG CTACTGATGG AACGGTTGGA ATTAGCAATT CATCGAGCCC AGCGGTTGCC TGGCTATCAC TTTGCAGTTT TGTTTCTTGA CCTGGATCGC TTCAAAATTA TCAATGACAG CCTGGGACAT TTAGCAGGAG ATCAGTTATT GACTGCTGTT GCTGAAAAAT TATGCTCCAC GCTGAGGGAC ATTGATCTTG TTGCCCGTTT GGGTGGGGAC GAGTTCGTCA TTTTACTTGA GGAAGTGAAG GACATTCAGG AAATTATTAA ATTTGTAGAT GAAATTTTTG CCGGATTACA AATCCCGATC TTGATTGCAG GGTGTGAAGT TTATATAACG GCTAGTATTG GTATTGTTTT CAGCGACGAC AAGCCTGCCC AGGCTTCACA TCTACTACGG AATGCTGATA TTGCCATGTA TCGAGCCAAG GCTAAAGGCA AAGACCGATA TGAAATCTTC AATATGGAGA TGCATGCACA GGCATTGAAT CGACTGCATT TAGAAAATGA TCTCCGCCGA GCGGTTGAAC GGCAAGAACT GATCCTCCAC TACCAACCAA TTCTGGCTTT AGATACTGGA CACATTGTTG GTTTTGAGAC CTTAGTTCGC TGGAAGCATC CAATTCAGGG ATTGAAATTT CCGGCTGATT TTATTGCTAT GGCTGAAGAA ACAGGGCTGA TCACCCATAT TGATATCTGG GCAATCAGTA TGGCCTGCCA TCAGCTAGCT AAATGGCAAG CTGCTTTTCC TGGCACTAAA ATGAAAGTGA GTGTCAATCT TTCAGCTCAC GATTTGCGTC GCTCTAATTT ACTAGAAGAC ATTGATAATG TTCTGGCTCA AGCCAACATT GATGGGTGTT GCTTATGCTT AGAGATTACT GAAAGTATGC TGATTGAAGA TATTGAGTCA ACCATCAAAT TGCTTAATCA ATTAAAAGAA AGAGGAGTCC AAATTCTAAT TGACGATTTT GGCACCGGGT ATTCATCGCT TAGTTATCTC CATCGCTTAC CTGTAGATAG CCTCAAAGTC GATCGTTCCT TTGTGAATCA AATTCAAGTT GATAATAGAA ATGCCAAAAT TGTTGAAACG ATCGCATCGC TATCTGTCTC CCTAGGCTTG GATGCGATCG CTGAAGGCAT TGAAACCCCA AAACAGCTAA AAAGGCTACA AAAGCTTGGC TATAAGTTTG GCCAGGGCTA TCTTTTCTCA CAGCCTTTAA CTCATAAGGA AGTAGAGATC CTGCTGGGCA GCCAATACTG CTATAATCTA CGCTAA
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Protein sequence | MERQHRSPVE QISPEDWENT PASVKRLVDV LLSSSTAAGQ ESHLIQFLDA TPIGIAVHDA TGQLTYINQA GQTILSIDRA YQVSTDQLSE VFQVYRQGTQ KLYPAESLPS TLALAGQVVG VDDLELHRRG QVIPLEVWAS PIFDAQGEVT HTIATFQDIS ARRQLETERK RYEQEQLQRE QSLNRVFQSI RNSLDLNTIF TTATEETAQL LKPLNCFVVQ YLPEQGIWQH VAEFNHEPGS ASTIGLEIPD ADNPFAAQLK QLQTVRVEDT SQVDDKINRE LARDTPGAWL LIPLVIEGQL WGSFTVTAVQ RPFTWNHNQV QLAQAVAAQL EVAIHQANLY QQLQMELAER CQAEAALRES ESRFQNIAAN IPGIIYGYRF CADGSDQFTY ISSGFCEVYG FEPDEALQDS SIIWQMTHPD DLERLKQSVI ESYQTLQRWR CQYRVMTPAG QLKWLEGVSR PTRQPNGDVI WDGLIIDISD RKQVEVALQE SEARYRLLAE NMNDLVCLHD LEGHYLYVSP SCETLLGYRQ DEMLGQVPFN FFHPDDQGRI YQEAFIPALS GEPRPITYRM RQKSGNYIWF ETLTKPIFGQ TGQIVQLQTT SRDVTERIQV QEQLKYDALH DALTGLPNRL LLMERLELAI HRAQRLPGYH FAVLFLDLDR FKIINDSLGH LAGDQLLTAV AEKLCSTLRD IDLVARLGGD EFVILLEEVK DIQEIIKFVD EIFAGLQIPI LIAGCEVYIT ASIGIVFSDD KPAQASHLLR NADIAMYRAK AKGKDRYEIF NMEMHAQALN RLHLENDLRR AVERQELILH YQPILALDTG HIVGFETLVR WKHPIQGLKF PADFIAMAEE TGLITHIDIW AISMACHQLA KWQAAFPGTK MKVSVNLSAH DLRRSNLLED IDNVLAQANI DGCCLCLEIT ESMLIEDIES TIKLLNQLKE RGVQILIDDF GTGYSSLSYL HRLPVDSLKV DRSFVNQIQV DNRNAKIVET IASLSVSLGL DAIAEGIETP KQLKRLQKLG YKFGQGYLFS QPLTHKEVEI LLGSQYCYNL R
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