Gene Cyan7425_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_3529 
Symbol 
ID7289466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp3475848 
End bp3478103 
Gene Length2256 bp 
Protein Length751 aa 
Translation table11 
GC content56% 
IMG OID643586499 
ProductFHA modulated glycosyl transferase/transpeptidase 
Protein accessionYP_002484212 
Protein GI220908901 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.554162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.675674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCC CCAGCTCTCC CCCTCCCCGC ACCTTTATCG GATCGATTAC CCAGGCAGTT 
CAAACCCTCC AGGCTCAAGT GAATTTTACC CGCCTGGCCC TGAAACCCAA TGTTCGTGTC
CCCGAATTGT GGGTGCAGGA TAGTGAGGCG GAACAGGCAC AGGTCTATCC CCTTCTGGGC
GATCGCTACG TGATTGGGCG GAGTAGCCGC TCCTGCGATA TTGTGGTTCG CAATCCGATC
GTCAGTCAGA TCCACGCCAC TCTGGAACGG CAGGGGGGAT ACGGTCATCC TTTTGTGTTG
AAGGATGAGA ACTCCACCAA TGGCATCTTT CGGGGGCGGC GGCGGCTTAA AACTTTGGCC
CTGCACCACA AAGATATTCT CACCCTGGGG CCACCAGAGC TGGAAGCGGC TGTGCGGGTG
CAGTACATGA ATCCTCCCCC CTGGTACGAA CGGCTGTGGC GGTATGGTCT GTATGGGACA
GCGGGGGCGA TCGGGGCCTT CTGCGCGGCT GTTGGGCTGG AGTGGCAAAA AATTCCTGTG
CTGCCCTTAC CTGCCGTTGA TCAGGGTCCA GTGATTGTCT TGTCCCGCGA TCGGGTTCCC
CTCGCTGATC GCGCCAGTCA GATCCATGGG GAGTTAACCC AGTTGGATGA TTTTTCTCCT
TACCTGCGCA AGGCTCTGAT TGCCTCTGAA GATAGCCGCT TCTACTGGCA TCCAGGGGTA
GACCCGATCG GCATTGTCCG GGCCTTAACC GTAAACTTTT CTGGCGGTGG AATTCGAGAG
GGGGCCAGTA CCCTCACCCA GCAGGTGGCC CGCAGTCTTT ACCGCAATTA CGTTGGCACA
GAAGACAATC TGGGGCGCAA GCTGCGAGAA GCGATCGTGG CCCTGAAGTT GGAAACCTAC
TACAGCAAAG ACTTTATCCT GCTCACCTAC CTGAACCGGG TTTACCTGGG CGTGGGTAAC
AGTGGGTTTG AAGATGCAGC CCATTTTTAT TTTGATAAAT CAGCTAAGGA TTTAACCCTG
GCAGAGGCGG CAACCCTGGT GGGCATTCTA CCTGCTCCCA ATACTTTTAA TCCAGTCAAA
AATTATAATC TGGCTCTGGC TTACCGCAAT CGTGTGCTCA CCCGCATGGC CGAACAGGGC
ATGATTACCC CTGATGAAGC TGAGCGGGGC CGGCGTACCC GAATTGTGAT CAGTCCCAAG
GCGAAGGAAC GGTTGCAAAG TATTCGGGCC CCCTATTACT ACAGTTACGT TTTTGATGAA
CTGGAGTCTC TGCTGGGAAA GGATCTGGCC CGGGAAGGCA ATTTTATTGT TGAAACCGGG
TTGAATCTCA AAATGCAAAC AGAAGCCGAG GCGGCCCTGC GTCGATCGGT GGCTCAGGAT
GGCTCGGCCT ATGGATTTTC CCAGGGAGCC GTCGTTACCC TAGACTTCAA AGCTGGAGAA
ATTCTCGCGC TGACCGGGGG GACGGACTAT AACCAGAGCC AATTTAATCG GGCCGTTCAA
GCCATGCGGC AACCGGGGTC AACCTTTAAA GTGTTTGTCT ATACCGCAGC GATCGCCCAG
GGAATCTCGC CCTATCAGAC TTACTCCTGT GCTCCCCTCA CCTGGATGGG ACAGAACTAC
GCCGGTTGTC GTCAAGGGGG TGGTGCTTCC GATATTGCGA CAGGAGGTGT GGCGCTGTCC
GAAAACCCGA TCGCACTGCG AGTCGCTCAG GATGTGGGAC TGGAGCGTGT GGTGCAACTG
GCCCGCCGCA TGGGGATTAA CTCTCCCCTC AAGCCTGTTC CCGGTTTAGT GCTGGGTCAG
AGTGAAGCCA CTTTGCTGGA GATGAGCCGG GCCTTTGCCG TGATCGCGAA TGGTGGGGTA
AGAACTCCCT CTCTGGCGAT CAGAAAAATC CTCGATGCCG GAGATTGTAC CAAGCCACAG
CAAATTCAAA CCTGTCGGGT GATTTACGAT CGTACGCAGG CTATGCAAGA AACCACCCGC
ATCCTCACCC CTCAGGTCGC TCAAACCATG ACCAGCCTGT TAAAGGGGGT AGTGAGCTCC
GGTACGGGTC GGGCCGCCGC CCTGGGTCTG GGGGAAGCAG GCAAAACCGG AACTACGGAT
GATGCCCGTG ACCTCTGGTT TATTGGTTAT ATTCCCTCCA GAAGCTTGCT CACTGGCGTT
TGGCTCGGTA ATGACAATAA TGCCCCAACC GCTGGCAGTA GTGGACTGGC CGCGGCCCTG
TGGGGAGACT ACATGGGACA AGTGGTAGGC CGGTGA
 
Protein sequence
MTPPSSPPPR TFIGSITQAV QTLQAQVNFT RLALKPNVRV PELWVQDSEA EQAQVYPLLG 
DRYVIGRSSR SCDIVVRNPI VSQIHATLER QGGYGHPFVL KDENSTNGIF RGRRRLKTLA
LHHKDILTLG PPELEAAVRV QYMNPPPWYE RLWRYGLYGT AGAIGAFCAA VGLEWQKIPV
LPLPAVDQGP VIVLSRDRVP LADRASQIHG ELTQLDDFSP YLRKALIASE DSRFYWHPGV
DPIGIVRALT VNFSGGGIRE GASTLTQQVA RSLYRNYVGT EDNLGRKLRE AIVALKLETY
YSKDFILLTY LNRVYLGVGN SGFEDAAHFY FDKSAKDLTL AEAATLVGIL PAPNTFNPVK
NYNLALAYRN RVLTRMAEQG MITPDEAERG RRTRIVISPK AKERLQSIRA PYYYSYVFDE
LESLLGKDLA REGNFIVETG LNLKMQTEAE AALRRSVAQD GSAYGFSQGA VVTLDFKAGE
ILALTGGTDY NQSQFNRAVQ AMRQPGSTFK VFVYTAAIAQ GISPYQTYSC APLTWMGQNY
AGCRQGGGAS DIATGGVALS ENPIALRVAQ DVGLERVVQL ARRMGINSPL KPVPGLVLGQ
SEATLLEMSR AFAVIANGGV RTPSLAIRKI LDAGDCTKPQ QIQTCRVIYD RTQAMQETTR
ILTPQVAQTM TSLLKGVVSS GTGRAAALGL GEAGKTGTTD DARDLWFIGY IPSRSLLTGV
WLGNDNNAPT AGSSGLAAAL WGDYMGQVVG R