Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_3279 |
Symbol | |
ID | 7289215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 3245321 |
End bp | 3249622 |
Gene Length | 4302 bp |
Protein Length | 1433 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643586252 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_002483965 |
Protein GI | 220908654 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.681112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.627666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTTA CTTCCAGCGC TGATCGTGGG GAATGGACAA GCCTAATTCG TCGAGATTGT CTACCCGTGC CGTCTCATAC TCCTGTCCAA ACTGTACTGG AGCAGATGCA TGGCGATCGT CCCACTTGCG TCTTGGTCTG CCAGCAAGAG CGTTTGGTTG GGCTATTTAC CGTGCAGGAT GCAGTGCGCC TGATGGTGCA GGAATACCCC TGGCAAACAG CCAGCATTGG GGAGGTGATG GCCCCGGCGA TTGCAGTGCT GAAGATCGAC GACAACCATG ATTTATCAGC GATTCGGCAA CTCTTTCAAC GGCATCGGCT CACCCATCTG GCAGTCGTGG CAGCAGAGGA TCGTCCCGTG GGAGTTCTGC TGGAATGCGA TCTGAAGGCC CTGGGCAAGG CAGAAGCTAC TTTCCAGACC CAGGCTGTAC AAGTCCAACA CCAGTTTCAG CAGGAACTCA ACCGCTACCA GAAGGCGGAA ACTACCTTAC GTCAGATTGT GCAGGGCACT GCGACGGAAA CCGGCGAGGA TTTCTTTCCC GCTCTGGTGG AAAACCTGGC AACTGTTCTG GGAGTACGCC ATGTCTTAGT TTCGGAACTG CGGGGCGACC AGATGTACAC CCTGGCCTTC TGGTCTAACC ATCAACAGCA GCCCAATATT GCCTATAGCC TTCTGGAGGG AGCTTGCTGT CGGCGGGCTG TGGCCGAAGG GACTTACTGT ATCAGTTCAG GGGTGCAGCA GACCTATCCC GGCAATGCCA TCATGCAAAG TCTCAACGCT GATAGCTATC TAGGGGTGGC TTTAACAGCT CCGGGCGGTA AGGTGTTGGG CACTCTCTGC ATTATTGACG ACAAACCTCT GGTTGATCCC GTTTGGGCAG AGTCTCTATT GCGGATGTTT GCGGACCGGG CTTCAGCTGA ATTGCGTCGC CAGCAAGCTG ATCAATCCCT GGAAGCTTTG AAGAACGAGT TGGAAAAAAA AGTGGCAGAA CGCACCGCTG CCCTGGAAGA TAGTCAAGCC CGCCTGGATC GCCTGTCCGA AAACTTGCCT GGGATGATTT TCCGCTATCT CACTCGCCCG GATGGCACCG ATGCTTTTCT CTACGTCAGT CCCCGTTGTC GAGAACTGTT CGAAGTTGAG CCAGAAGCCG TTCTCAGCCA AACTATCCAT CCGTTCAGTT TTATCCATCC AGAGGATAGA CCCAAGGTGC AAGCCAGAAT CGCACGTTGC CTGGCGCAAA ATTCAACGAT TTGTGAAGAG AACTTCCAGA TTATTACGCC ATCAGGAGAC CAAAAATATT TACAAGCTGT TGCCAGCCTT TTTCACCAAC CCAACGGAGA GGTGATCTGG GACGGTTTAA TGCTGGATAT TAGCAAAATC CAACGGGCAG AAATTGCCTT GAAAACCCTC GTTGCAGGTA CGGCTACAGC CACTGGGGCA AACTTCTTCC GGGAACTGGC TCGTTGTACA GCCACTGCTT TAAAGGTGCC CTACGTGCTG GTCACCGAAC GGATCGGCAA CTGTCTGGAA ACTTTAGGTT TCTGGGCTGA GGGGATGCTA CAACCCAAGC TGAACTACGA GATCAGCCAG ACCCCCTGTG AAGTTTCCCT TAGAGAAGGG TCTCTCTGTC AGGTGCGGGG GGTGAAAGAG GCTTTTCCTA ACGATCCACA TTTGATCGAA ATGCAGGCTG ATGGCTATCT GGGTGTTGCT CTCAAAGATG CTCAAGGTCA GGCGATCGGC AATCTTTGCA TTCTGGATCG GCAACCCCTC CGCCATGTTG AACTGGCTGA ACAAATCTTG CAGGTGTTTG CGGCCCGAGC TGGAGTGGAA CTGGAGCGTC AGCAGGCGGA ACTGGAAGTG CGGCAAACCC AGCGGTTTCT AGACTCCATT ATTGAGAACC TGCCCAACAT GGTGTTTGTC AAAGATGCTC AGTTCCTGCG CTTTGTCCGT TTTAACAAGG CGGGAGAAGA GTTATTAGGC TATGTCCGCG AAGACCTGCT GGGTAAGAAT GACTACGATT TCTTTCCTGC CCAGGAAGCT GACTTTTTTG TCTCTAAAGA TCGGGAAGTT TTGGCAACGG GTAATCTGCT AGATATTGCT GAAGAGCAGA TCCAAACTCG TACTGGGGAG ACGCGGTTGC TCCATACTAA AAAAATTCCC ATCCTGAATG ATGCCGGGCA GCCTCAATAC TTGCTGGGCA TTTCAGAAGA TATTACTGAG TATCGCCAGG CGGAATTGGC TTTACGGGAA AGTGAGACGC GACTGCGGCT GGCCCTGGAA GTGTCACAAG CGATCGCCTG GGAGCGGGAT CTGGAAGCTG ATCTGGTCTA TTTCACGGGG GCCATGACTC TGCCGGTGCC CGCCACCCTT TCCTTTGCAG AATTGTTGGG GTTGATCCAT CCGCTGGATC GGGAGGCTTT TCAACGGGCG CATCAAACGG CGATCGCCAA CAGGGGAAGT TTTCAGATCG AACATCGGAT CAGGGTTGCT GATGCGGCCC AAACCTGGCG ATGGTATCAG GTCCAGGCTA GCGTGATCAC CGATGCCAAT AACCAACCGA TCCGCCTGAT TGGCATGTCT TTTGATATCA GCGATCGCAA ACAAGCCGAA GCCGAACTGT TGCAAGCTAA AGAAACTGCC GAAGCTGCCA CCCGTGCTAA AGGAGATTTT CTGGCCACCA TGAGCCATGA GATCCGCACC CCCATGAATG CAGTAATCGG CATGACCGGC TTACTCCTGA ATACCCCCCT TTCCCCAGAG CAACGCCAAT ACGGAGAAAC GATTCGCAAC GCTGGCGAGT CCTTGCTGTC TGTGATCAAT GATATTCTTG ACTTTTCCCG GATTGAGTCT GGCCATTTAG ATCTGGAAGA ACATCCCTTT GAACTGCCCC ATTGTGTTGC TGAGGTGATC GATCTACTGG CCAATCGGGC CGTTGAAAAA TCCCTGCACC TGGAAGTCCA GATTGACCCC GGTGTCCCGG CAGTGATTGT GGCTGATTCT GCCCGGCTGC GACAAATCCT GGTGAACCTG GTCGCTAATG CCCTCAAGTT TACCGATCAA GGTGAGGTGA TGATCAGGGT GAAGTCCGTT GCAGTCAGTC CAGATGGGCA GCAGCAGACC CTAGAATTTT CGGTTCAGGA TACGGGTATT GGTATTGCGC CCAAACAGTT GGAGCATTTG TTTCAGCCCT TCAGTCAGGT GGATAGTTCC AGCACTCGTC GCTACGGCGG TTCGGGATTG GGGTTGGTGA TTTCAAAGCG TCTGTGTGAA CGGATGGGAG GACAGATCCG TGTCCAGAGT CGGGCGGGAG TAGGCTCAAC CTTTAGTTTT ACCTTGCCAG TGCGGGTGTC CCTCACCCCA ATCATGCCTC GGATCGACCC TCCCTCGTTG ACCAGCCAGC CCTGGGATTC CAGTTTTGCC CTGCGCTATC CACTCAAAAT TCTTGTAGCA GAAGATAACA CAACTAATCA GCAGGTGATC CGTTTGATGT TGCAGCAACT GGGTTATGCT GCCGATCTGG TGGCGAACGG TCAGGAAGCA ATTCAGGCTC TGAATCAACA ACCCTATGAT CTGCTATTCA TGGATCTACA AATGCCGATC ATGGATGGCT TGTCGGCCAC TCGCCAGATT CGCCAGTCCA TGGGGCCCGA TCCCTGGATA ATTGGTTTAA GTGCGAATGC GTTTGCTGAT ACGCAGGCTG AAGCTTTTGT AGCGGGCATG AATGATTATT TGACCAAGCC CCTGAAGATC GAAACTTTGG CAGCCGCCCT CCAGGGATTT CCTTATCCGC AATCTCTGTC CCCAGAGCTA TTTACCCCAG AGCCTTTGTC CCCGGCGGAT CAGGGGATGG AGCCTCTCGC TCCTCAAGAG GTCCAGCCTG ATCGAGCCAA TGGCACACCA AAGCCCAGCT TGGCCGAACC TGAGTCAAGA GAAGAGCCTA TTTGCGTCTC CTATCTACGC AATCGGTTTA AACCCAGTAG CCTGCGCACG CTGATCGAAA TGTTCCTGGA AGATGCAGCG CAACACCTCC AGCACCTTGG GACTGCTCTT GAAGAGGAAA ATTATCCCCA CTTGAATCAC GTTGCCCATA GTCTCAAAGG TAGTAGTGCC ACGATGTCTG CCCAGGAGTT AGCGCGGCTT TGCCAGGAGC TAGAGCAGTT GAGCAGGCGG AGTGGGTTAG AGCTGACGGC GATCGATCGG CTAACCCTGA ACAACCTGCT GCGGCAATTA GAGACCGAGT ACCACCGTGT TGCAACTGCC TTAAAACAGG AGTGGGAATG GCAAGACCAA ACCATGGCTT GA
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Protein sequence | MAVTSSADRG EWTSLIRRDC LPVPSHTPVQ TVLEQMHGDR PTCVLVCQQE RLVGLFTVQD AVRLMVQEYP WQTASIGEVM APAIAVLKID DNHDLSAIRQ LFQRHRLTHL AVVAAEDRPV GVLLECDLKA LGKAEATFQT QAVQVQHQFQ QELNRYQKAE TTLRQIVQGT ATETGEDFFP ALVENLATVL GVRHVLVSEL RGDQMYTLAF WSNHQQQPNI AYSLLEGACC RRAVAEGTYC ISSGVQQTYP GNAIMQSLNA DSYLGVALTA PGGKVLGTLC IIDDKPLVDP VWAESLLRMF ADRASAELRR QQADQSLEAL KNELEKKVAE RTAALEDSQA RLDRLSENLP GMIFRYLTRP DGTDAFLYVS PRCRELFEVE PEAVLSQTIH PFSFIHPEDR PKVQARIARC LAQNSTICEE NFQIITPSGD QKYLQAVASL FHQPNGEVIW DGLMLDISKI QRAEIALKTL VAGTATATGA NFFRELARCT ATALKVPYVL VTERIGNCLE TLGFWAEGML QPKLNYEISQ TPCEVSLREG SLCQVRGVKE AFPNDPHLIE MQADGYLGVA LKDAQGQAIG NLCILDRQPL RHVELAEQIL QVFAARAGVE LERQQAELEV RQTQRFLDSI IENLPNMVFV KDAQFLRFVR FNKAGEELLG YVREDLLGKN DYDFFPAQEA DFFVSKDREV LATGNLLDIA EEQIQTRTGE TRLLHTKKIP ILNDAGQPQY LLGISEDITE YRQAELALRE SETRLRLALE VSQAIAWERD LEADLVYFTG AMTLPVPATL SFAELLGLIH PLDREAFQRA HQTAIANRGS FQIEHRIRVA DAAQTWRWYQ VQASVITDAN NQPIRLIGMS FDISDRKQAE AELLQAKETA EAATRAKGDF LATMSHEIRT PMNAVIGMTG LLLNTPLSPE QRQYGETIRN AGESLLSVIN DILDFSRIES GHLDLEEHPF ELPHCVAEVI DLLANRAVEK SLHLEVQIDP GVPAVIVADS ARLRQILVNL VANALKFTDQ GEVMIRVKSV AVSPDGQQQT LEFSVQDTGI GIAPKQLEHL FQPFSQVDSS STRRYGGSGL GLVISKRLCE RMGGQIRVQS RAGVGSTFSF TLPVRVSLTP IMPRIDPPSL TSQPWDSSFA LRYPLKILVA EDNTTNQQVI RLMLQQLGYA ADLVANGQEA IQALNQQPYD LLFMDLQMPI MDGLSATRQI RQSMGPDPWI IGLSANAFAD TQAEAFVAGM NDYLTKPLKI ETLAAALQGF PYPQSLSPEL FTPEPLSPAD QGMEPLAPQE VQPDRANGTP KPSLAEPESR EEPICVSYLR NRFKPSSLRT LIEMFLEDAA QHLQHLGTAL EEENYPHLNH VAHSLKGSSA TMSAQELARL CQELEQLSRR SGLELTAIDR LTLNNLLRQL ETEYHRVATA LKQEWEWQDQ TMA
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