Gene Cyan7425_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_3279 
Symbol 
ID7289215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp3245321 
End bp3249622 
Gene Length4302 bp 
Protein Length1433 aa 
Translation table11 
GC content53% 
IMG OID643586252 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002483965 
Protein GI220908654 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.681112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.627666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTA CTTCCAGCGC TGATCGTGGG GAATGGACAA GCCTAATTCG TCGAGATTGT 
CTACCCGTGC CGTCTCATAC TCCTGTCCAA ACTGTACTGG AGCAGATGCA TGGCGATCGT
CCCACTTGCG TCTTGGTCTG CCAGCAAGAG CGTTTGGTTG GGCTATTTAC CGTGCAGGAT
GCAGTGCGCC TGATGGTGCA GGAATACCCC TGGCAAACAG CCAGCATTGG GGAGGTGATG
GCCCCGGCGA TTGCAGTGCT GAAGATCGAC GACAACCATG ATTTATCAGC GATTCGGCAA
CTCTTTCAAC GGCATCGGCT CACCCATCTG GCAGTCGTGG CAGCAGAGGA TCGTCCCGTG
GGAGTTCTGC TGGAATGCGA TCTGAAGGCC CTGGGCAAGG CAGAAGCTAC TTTCCAGACC
CAGGCTGTAC AAGTCCAACA CCAGTTTCAG CAGGAACTCA ACCGCTACCA GAAGGCGGAA
ACTACCTTAC GTCAGATTGT GCAGGGCACT GCGACGGAAA CCGGCGAGGA TTTCTTTCCC
GCTCTGGTGG AAAACCTGGC AACTGTTCTG GGAGTACGCC ATGTCTTAGT TTCGGAACTG
CGGGGCGACC AGATGTACAC CCTGGCCTTC TGGTCTAACC ATCAACAGCA GCCCAATATT
GCCTATAGCC TTCTGGAGGG AGCTTGCTGT CGGCGGGCTG TGGCCGAAGG GACTTACTGT
ATCAGTTCAG GGGTGCAGCA GACCTATCCC GGCAATGCCA TCATGCAAAG TCTCAACGCT
GATAGCTATC TAGGGGTGGC TTTAACAGCT CCGGGCGGTA AGGTGTTGGG CACTCTCTGC
ATTATTGACG ACAAACCTCT GGTTGATCCC GTTTGGGCAG AGTCTCTATT GCGGATGTTT
GCGGACCGGG CTTCAGCTGA ATTGCGTCGC CAGCAAGCTG ATCAATCCCT GGAAGCTTTG
AAGAACGAGT TGGAAAAAAA AGTGGCAGAA CGCACCGCTG CCCTGGAAGA TAGTCAAGCC
CGCCTGGATC GCCTGTCCGA AAACTTGCCT GGGATGATTT TCCGCTATCT CACTCGCCCG
GATGGCACCG ATGCTTTTCT CTACGTCAGT CCCCGTTGTC GAGAACTGTT CGAAGTTGAG
CCAGAAGCCG TTCTCAGCCA AACTATCCAT CCGTTCAGTT TTATCCATCC AGAGGATAGA
CCCAAGGTGC AAGCCAGAAT CGCACGTTGC CTGGCGCAAA ATTCAACGAT TTGTGAAGAG
AACTTCCAGA TTATTACGCC ATCAGGAGAC CAAAAATATT TACAAGCTGT TGCCAGCCTT
TTTCACCAAC CCAACGGAGA GGTGATCTGG GACGGTTTAA TGCTGGATAT TAGCAAAATC
CAACGGGCAG AAATTGCCTT GAAAACCCTC GTTGCAGGTA CGGCTACAGC CACTGGGGCA
AACTTCTTCC GGGAACTGGC TCGTTGTACA GCCACTGCTT TAAAGGTGCC CTACGTGCTG
GTCACCGAAC GGATCGGCAA CTGTCTGGAA ACTTTAGGTT TCTGGGCTGA GGGGATGCTA
CAACCCAAGC TGAACTACGA GATCAGCCAG ACCCCCTGTG AAGTTTCCCT TAGAGAAGGG
TCTCTCTGTC AGGTGCGGGG GGTGAAAGAG GCTTTTCCTA ACGATCCACA TTTGATCGAA
ATGCAGGCTG ATGGCTATCT GGGTGTTGCT CTCAAAGATG CTCAAGGTCA GGCGATCGGC
AATCTTTGCA TTCTGGATCG GCAACCCCTC CGCCATGTTG AACTGGCTGA ACAAATCTTG
CAGGTGTTTG CGGCCCGAGC TGGAGTGGAA CTGGAGCGTC AGCAGGCGGA ACTGGAAGTG
CGGCAAACCC AGCGGTTTCT AGACTCCATT ATTGAGAACC TGCCCAACAT GGTGTTTGTC
AAAGATGCTC AGTTCCTGCG CTTTGTCCGT TTTAACAAGG CGGGAGAAGA GTTATTAGGC
TATGTCCGCG AAGACCTGCT GGGTAAGAAT GACTACGATT TCTTTCCTGC CCAGGAAGCT
GACTTTTTTG TCTCTAAAGA TCGGGAAGTT TTGGCAACGG GTAATCTGCT AGATATTGCT
GAAGAGCAGA TCCAAACTCG TACTGGGGAG ACGCGGTTGC TCCATACTAA AAAAATTCCC
ATCCTGAATG ATGCCGGGCA GCCTCAATAC TTGCTGGGCA TTTCAGAAGA TATTACTGAG
TATCGCCAGG CGGAATTGGC TTTACGGGAA AGTGAGACGC GACTGCGGCT GGCCCTGGAA
GTGTCACAAG CGATCGCCTG GGAGCGGGAT CTGGAAGCTG ATCTGGTCTA TTTCACGGGG
GCCATGACTC TGCCGGTGCC CGCCACCCTT TCCTTTGCAG AATTGTTGGG GTTGATCCAT
CCGCTGGATC GGGAGGCTTT TCAACGGGCG CATCAAACGG CGATCGCCAA CAGGGGAAGT
TTTCAGATCG AACATCGGAT CAGGGTTGCT GATGCGGCCC AAACCTGGCG ATGGTATCAG
GTCCAGGCTA GCGTGATCAC CGATGCCAAT AACCAACCGA TCCGCCTGAT TGGCATGTCT
TTTGATATCA GCGATCGCAA ACAAGCCGAA GCCGAACTGT TGCAAGCTAA AGAAACTGCC
GAAGCTGCCA CCCGTGCTAA AGGAGATTTT CTGGCCACCA TGAGCCATGA GATCCGCACC
CCCATGAATG CAGTAATCGG CATGACCGGC TTACTCCTGA ATACCCCCCT TTCCCCAGAG
CAACGCCAAT ACGGAGAAAC GATTCGCAAC GCTGGCGAGT CCTTGCTGTC TGTGATCAAT
GATATTCTTG ACTTTTCCCG GATTGAGTCT GGCCATTTAG ATCTGGAAGA ACATCCCTTT
GAACTGCCCC ATTGTGTTGC TGAGGTGATC GATCTACTGG CCAATCGGGC CGTTGAAAAA
TCCCTGCACC TGGAAGTCCA GATTGACCCC GGTGTCCCGG CAGTGATTGT GGCTGATTCT
GCCCGGCTGC GACAAATCCT GGTGAACCTG GTCGCTAATG CCCTCAAGTT TACCGATCAA
GGTGAGGTGA TGATCAGGGT GAAGTCCGTT GCAGTCAGTC CAGATGGGCA GCAGCAGACC
CTAGAATTTT CGGTTCAGGA TACGGGTATT GGTATTGCGC CCAAACAGTT GGAGCATTTG
TTTCAGCCCT TCAGTCAGGT GGATAGTTCC AGCACTCGTC GCTACGGCGG TTCGGGATTG
GGGTTGGTGA TTTCAAAGCG TCTGTGTGAA CGGATGGGAG GACAGATCCG TGTCCAGAGT
CGGGCGGGAG TAGGCTCAAC CTTTAGTTTT ACCTTGCCAG TGCGGGTGTC CCTCACCCCA
ATCATGCCTC GGATCGACCC TCCCTCGTTG ACCAGCCAGC CCTGGGATTC CAGTTTTGCC
CTGCGCTATC CACTCAAAAT TCTTGTAGCA GAAGATAACA CAACTAATCA GCAGGTGATC
CGTTTGATGT TGCAGCAACT GGGTTATGCT GCCGATCTGG TGGCGAACGG TCAGGAAGCA
ATTCAGGCTC TGAATCAACA ACCCTATGAT CTGCTATTCA TGGATCTACA AATGCCGATC
ATGGATGGCT TGTCGGCCAC TCGCCAGATT CGCCAGTCCA TGGGGCCCGA TCCCTGGATA
ATTGGTTTAA GTGCGAATGC GTTTGCTGAT ACGCAGGCTG AAGCTTTTGT AGCGGGCATG
AATGATTATT TGACCAAGCC CCTGAAGATC GAAACTTTGG CAGCCGCCCT CCAGGGATTT
CCTTATCCGC AATCTCTGTC CCCAGAGCTA TTTACCCCAG AGCCTTTGTC CCCGGCGGAT
CAGGGGATGG AGCCTCTCGC TCCTCAAGAG GTCCAGCCTG ATCGAGCCAA TGGCACACCA
AAGCCCAGCT TGGCCGAACC TGAGTCAAGA GAAGAGCCTA TTTGCGTCTC CTATCTACGC
AATCGGTTTA AACCCAGTAG CCTGCGCACG CTGATCGAAA TGTTCCTGGA AGATGCAGCG
CAACACCTCC AGCACCTTGG GACTGCTCTT GAAGAGGAAA ATTATCCCCA CTTGAATCAC
GTTGCCCATA GTCTCAAAGG TAGTAGTGCC ACGATGTCTG CCCAGGAGTT AGCGCGGCTT
TGCCAGGAGC TAGAGCAGTT GAGCAGGCGG AGTGGGTTAG AGCTGACGGC GATCGATCGG
CTAACCCTGA ACAACCTGCT GCGGCAATTA GAGACCGAGT ACCACCGTGT TGCAACTGCC
TTAAAACAGG AGTGGGAATG GCAAGACCAA ACCATGGCTT GA
 
Protein sequence
MAVTSSADRG EWTSLIRRDC LPVPSHTPVQ TVLEQMHGDR PTCVLVCQQE RLVGLFTVQD 
AVRLMVQEYP WQTASIGEVM APAIAVLKID DNHDLSAIRQ LFQRHRLTHL AVVAAEDRPV
GVLLECDLKA LGKAEATFQT QAVQVQHQFQ QELNRYQKAE TTLRQIVQGT ATETGEDFFP
ALVENLATVL GVRHVLVSEL RGDQMYTLAF WSNHQQQPNI AYSLLEGACC RRAVAEGTYC
ISSGVQQTYP GNAIMQSLNA DSYLGVALTA PGGKVLGTLC IIDDKPLVDP VWAESLLRMF
ADRASAELRR QQADQSLEAL KNELEKKVAE RTAALEDSQA RLDRLSENLP GMIFRYLTRP
DGTDAFLYVS PRCRELFEVE PEAVLSQTIH PFSFIHPEDR PKVQARIARC LAQNSTICEE
NFQIITPSGD QKYLQAVASL FHQPNGEVIW DGLMLDISKI QRAEIALKTL VAGTATATGA
NFFRELARCT ATALKVPYVL VTERIGNCLE TLGFWAEGML QPKLNYEISQ TPCEVSLREG
SLCQVRGVKE AFPNDPHLIE MQADGYLGVA LKDAQGQAIG NLCILDRQPL RHVELAEQIL
QVFAARAGVE LERQQAELEV RQTQRFLDSI IENLPNMVFV KDAQFLRFVR FNKAGEELLG
YVREDLLGKN DYDFFPAQEA DFFVSKDREV LATGNLLDIA EEQIQTRTGE TRLLHTKKIP
ILNDAGQPQY LLGISEDITE YRQAELALRE SETRLRLALE VSQAIAWERD LEADLVYFTG
AMTLPVPATL SFAELLGLIH PLDREAFQRA HQTAIANRGS FQIEHRIRVA DAAQTWRWYQ
VQASVITDAN NQPIRLIGMS FDISDRKQAE AELLQAKETA EAATRAKGDF LATMSHEIRT
PMNAVIGMTG LLLNTPLSPE QRQYGETIRN AGESLLSVIN DILDFSRIES GHLDLEEHPF
ELPHCVAEVI DLLANRAVEK SLHLEVQIDP GVPAVIVADS ARLRQILVNL VANALKFTDQ
GEVMIRVKSV AVSPDGQQQT LEFSVQDTGI GIAPKQLEHL FQPFSQVDSS STRRYGGSGL
GLVISKRLCE RMGGQIRVQS RAGVGSTFSF TLPVRVSLTP IMPRIDPPSL TSQPWDSSFA
LRYPLKILVA EDNTTNQQVI RLMLQQLGYA ADLVANGQEA IQALNQQPYD LLFMDLQMPI
MDGLSATRQI RQSMGPDPWI IGLSANAFAD TQAEAFVAGM NDYLTKPLKI ETLAAALQGF
PYPQSLSPEL FTPEPLSPAD QGMEPLAPQE VQPDRANGTP KPSLAEPESR EEPICVSYLR
NRFKPSSLRT LIEMFLEDAA QHLQHLGTAL EEENYPHLNH VAHSLKGSSA TMSAQELARL
CQELEQLSRR SGLELTAIDR LTLNNLLRQL ETEYHRVATA LKQEWEWQDQ TMA