| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3275 |
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| Symbol | |
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| ID | 7289211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | + |
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| Start bp | 3237693 |
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| End bp | 3240977 |
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| Gene Length | 3285 bp |
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| Protein Length | 1094 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643586248 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002483961 |
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| Protein GI | 220908650 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.393091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGG CGCAAGCAAT TCAGTCCGAG GACAAAGAGT TTCTGGCTTA TACTTCTCGG
TTTTTGCGAC TGATTGACAG CCTACCCGGT ATTGTTTTTT CTGGTTCCAA TGATGCTCAG
TGGTCCATGC AATACCTCAG CCGCGGTTGC CTGGCTCTAA CCGGTTATAG CAGTGATGAG
CTGGCCCAAA AGGGGGGAGA AGCATTCAAT GCCATTACCC ATCCTGAAGA TCTGCCTCGC
GTGCTGGCCA CCTTAAGCGC GGCGATCGCC TCCTCAGAGC CCTATGAAGT AGAATATCGA
ATTCGGACCA AGAGCGGGGA AGAAAAATGG GTGCTGGAAA AGGGTCATCG TGTCCTGGAC
GAGGATCAGT GTACCTGTGG TATTGAAGGC TTTATTACCG ATATTACCCC CCTGAAGCGG
GCAGAAGCTG CCTTAATCCA GGCCGAGGCT CGTTGGCGAT CGTTGATTCA TAATAGTTCT
GACCTGATTA CCATCCTGGA TGCCCAGGGA ACGGTTCTTT ACCATAGTCC CGTACTGAAG
CGGTTGCTGG GTTATCATCC CCAGAACTGT GAAGGCAAAA GTGCGTTTGG ACTGGTCCAC
CCTCAGGATC GGAAACAGGT ACAGCAAACC TTCCAGCAGG CAATCACCCA TACCGAATTC
ACACTGACAG TAGAATATAG GTTCCGCCAT CAGGATGGCT CCTGGCGCTT TCTCGAATCC
ACCGGACGCA ATCTCCTGGC AGACCCCGCC GTGGCTGGCA TTGTGGTGAA TACCCGCGAT
ATTACTGACC ATAAACGCAC CGAATCCGCT CTTCGCCAGG CTGAAGAAAA ATATCGCAGC
ATCTTTGAAA ATGCAGTGGA GGGTATTTTT CAATCCTCTC CGGAAGGCCG ATATATTCGG
GTCAACCCCG CCCTGGCCCG CATGTATGGT TACGATTCCC CGGAGGAGTT ACTCGCCCAC
CTGACCGATA TTGGCCGTCA GCTTTACGTC GATCCAGAGC GGCGAGCAGA ATTTCAACGC
TTGATTGACC AGCAGACGAT CGTGACCCAT TTTGAAGCCC AGGTCTATCG ACGCGACGGC
AGTATTATCT GGATCACGGA ACACGCTCGG GCCGTACGAG ATGGGACGGG GAAACTGCTC
TACTACGAGG GCACTGTCGA AAACATCACT GACCGGAAGC GCACGGAACT GCAACTGCTC
CAAACCACCT CGGAGTTAAA GGCCATTTTC CAGGCGTTAC CCGATCTCTA TTTTCGTGTA
GACCACGACA GTACAATTCT GGACTTCAAA GCGGGGCGGC GCACCGATCT TTATCTGGAG
CCGGAGGAGT TTCTGGGACG GCGAATGACC GACGTTTTAC CGCCTCCGGT GGCCACACAA
TTCAGCGGGG CGATCGACCG GATTTTATCT GGGGAAGCAC GGGTCGATCT GGAGTATGTT
CTGCCCATGC CAGATGGGGA GCAAACCTTT GAGGCCCGCC TTCTTCCCCT TCTGCAGACC
CAGATCATCG CCGTGATCCG CAATATCACT AAGCGCAAAC GGGCAGAAAA TGAACTCCGG
CAGGCTGAGG AAAAATATCG CAGCATCTTT GAAAATGCCA CCGAAGGCAT CTTCCAATCC
AGCCCCTCGG GTAGCTACAT CAGTGCCAAT CCAGCCCTGG CCAGAATCTA TGGCTACGAT
TCCCCCCAGG AACTCCAACA CCACCTGACC GATATCGGTC GCCAGCTTTA CGTCAACCCC
GATCGCCGCC AGCAATTTGT CCATTCCATT CTTGAGCAAG GCCAGGTGAC CGACTTTGAA
TCCCAGGTCT ACCGCAAGGA TGGTTCAGTG ATCTGGATTT CTGAAAATGC CCGTGCTGTC
CGCGATCGGC AGGGAAACAT TCTTTACTTT GAAGGTACCG TTGAAGACAT CAGTGCCCGC
AAACAGGCCG AACTGACCAT CCATTACCAG GCTTTCCACG ATCTGCTCAC CGGCCTGCCC
AACCGAGCTC TGTTTGACGA TCGTCTCAAT CAGGCCCTGG CAGATGCCCG ACGCTATCAA
CATCTGCTGG CAGTCTTTTT CCTCGATCTA GATCGGTTTA AAGTCATTAA CGATACCCTG
GGCCACGCCA TCGGCGATCA GTTATTGCAA CAGGTTGCCC AGCGCTTGCT CCCGTGCCTG
CGCGAAATCG ATACTATTGC CCGTTGGGGG GGAGATGAAT TTACCCTCCT CTTGCCCCAT
GTGCAAACCC CGGCGGATAG CGTCAAGATT GCTGAACGGT TGCTAGCCAG CTTGAAACCC
CCCTTTAGCC TCAAGGGCCA CAATCTCCAT ATCACCGCCA GCCTGGGCAT CGCCCTCTAC
CCCCACGATG GAGAAGATGG CACCACCCTG CTCCGTAATG CTGATGCTGC CCTGTATCGG
GCCAAGGAAG AGGGACGCAA TGGGCTCTAC TGCTATACAC CAATGCTCAA CTCTCGCGGC
CATGAACTGT TGGCGCTAGA GAGTGAACTG CACAAAGCCT TAGAGCAGCA GGAATTAGAC
GTTTACTATC AACCTCAGAT CAATGCGGCC ACCGGAGAAA TTCTACGTCT GGAAGCCCTG
GTGCGCTGGC AGCATTCCCA ACTGGGCCTG GTTTCTCCTC AAACCTTTAT TGGATTGGCA
GAAGAGAATG GTTTGATTAT GCCCATTGGC CAGTGGGTGC TGGAAACGGC CTGCCATCAA
TGCCGCCAAT GGCAAGCGCG GGGCTTTCCC GGTCTGGGGA CTGCAGTCAA TCTCTCTGTG
CGGCAATTTC AACAACCTCA CCTGGTCCAG CAAGTGGCTG AAACCCTACA GTATACGGGG
CTGGCCGCCG ATCGGCTGGA GCTGGAAATC ACCGAAACCA CCGCCATGCA AAATGTGAAT
CTCACCCGTA CCCTCCTGCA TGAGCTGGAT CAGATGGGGG TGGGCATTGC CCTGGATGAT
TTTGGCAGCG GGTATTCTTC CCTCAACTAT CTCCGTCAGT TTCCGCTGCA TTCGATTAAG
ATTGATCGCA CCTTTATCCA GGAATTGCCC TACTCGGTTC AGGATCAGGC GATCGTCAAA
GCAGTCATTG CCCTGGGACG AGGTTTAAAT CTCAGCGTGG TGGCAGAAGG GGTAGAATCC
CAGTCCCAAC TGAAGGTTTT ACGCTCCCTC GGCTGTGACA TTATCCAGGG TTACTTCTTT
GGCCCGCCGA TCGCCGCTGC CGCCATGACT CAGCTCCTGG AGCAATGTAC CTGTAGCGAG
AGTGGCCAAC CCCTGTTGCC CCAGCCCAAA GCAATCCTCC ATTGA
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| Protein sequence | MSKAQAIQSE DKEFLAYTSR FLRLIDSLPG IVFSGSNDAQ WSMQYLSRGC LALTGYSSDE
LAQKGGEAFN AITHPEDLPR VLATLSAAIA SSEPYEVEYR IRTKSGEEKW VLEKGHRVLD
EDQCTCGIEG FITDITPLKR AEAALIQAEA RWRSLIHNSS DLITILDAQG TVLYHSPVLK
RLLGYHPQNC EGKSAFGLVH PQDRKQVQQT FQQAITHTEF TLTVEYRFRH QDGSWRFLES
TGRNLLADPA VAGIVVNTRD ITDHKRTESA LRQAEEKYRS IFENAVEGIF QSSPEGRYIR
VNPALARMYG YDSPEELLAH LTDIGRQLYV DPERRAEFQR LIDQQTIVTH FEAQVYRRDG
SIIWITEHAR AVRDGTGKLL YYEGTVENIT DRKRTELQLL QTTSELKAIF QALPDLYFRV
DHDSTILDFK AGRRTDLYLE PEEFLGRRMT DVLPPPVATQ FSGAIDRILS GEARVDLEYV
LPMPDGEQTF EARLLPLLQT QIIAVIRNIT KRKRAENELR QAEEKYRSIF ENATEGIFQS
SPSGSYISAN PALARIYGYD SPQELQHHLT DIGRQLYVNP DRRQQFVHSI LEQGQVTDFE
SQVYRKDGSV IWISENARAV RDRQGNILYF EGTVEDISAR KQAELTIHYQ AFHDLLTGLP
NRALFDDRLN QALADARRYQ HLLAVFFLDL DRFKVINDTL GHAIGDQLLQ QVAQRLLPCL
REIDTIARWG GDEFTLLLPH VQTPADSVKI AERLLASLKP PFSLKGHNLH ITASLGIALY
PHDGEDGTTL LRNADAALYR AKEEGRNGLY CYTPMLNSRG HELLALESEL HKALEQQELD
VYYQPQINAA TGEILRLEAL VRWQHSQLGL VSPQTFIGLA EENGLIMPIG QWVLETACHQ
CRQWQARGFP GLGTAVNLSV RQFQQPHLVQ QVAETLQYTG LAADRLELEI TETTAMQNVN
LTRTLLHELD QMGVGIALDD FGSGYSSLNY LRQFPLHSIK IDRTFIQELP YSVQDQAIVK
AVIALGRGLN LSVVAEGVES QSQLKVLRSL GCDIIQGYFF GPPIAAAAMT QLLEQCTCSE
SGQPLLPQPK AILH
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