Gene Cyan7425_3275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_3275 
Symbol 
ID7289211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp3237693 
End bp3240977 
Gene Length3285 bp 
Protein Length1094 aa 
Translation table11 
GC content54% 
IMG OID643586248 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 
Protein accessionYP_002483961 
Protein GI220908650 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.393091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGG CGCAAGCAAT TCAGTCCGAG GACAAAGAGT TTCTGGCTTA TACTTCTCGG 
TTTTTGCGAC TGATTGACAG CCTACCCGGT ATTGTTTTTT CTGGTTCCAA TGATGCTCAG
TGGTCCATGC AATACCTCAG CCGCGGTTGC CTGGCTCTAA CCGGTTATAG CAGTGATGAG
CTGGCCCAAA AGGGGGGAGA AGCATTCAAT GCCATTACCC ATCCTGAAGA TCTGCCTCGC
GTGCTGGCCA CCTTAAGCGC GGCGATCGCC TCCTCAGAGC CCTATGAAGT AGAATATCGA
ATTCGGACCA AGAGCGGGGA AGAAAAATGG GTGCTGGAAA AGGGTCATCG TGTCCTGGAC
GAGGATCAGT GTACCTGTGG TATTGAAGGC TTTATTACCG ATATTACCCC CCTGAAGCGG
GCAGAAGCTG CCTTAATCCA GGCCGAGGCT CGTTGGCGAT CGTTGATTCA TAATAGTTCT
GACCTGATTA CCATCCTGGA TGCCCAGGGA ACGGTTCTTT ACCATAGTCC CGTACTGAAG
CGGTTGCTGG GTTATCATCC CCAGAACTGT GAAGGCAAAA GTGCGTTTGG ACTGGTCCAC
CCTCAGGATC GGAAACAGGT ACAGCAAACC TTCCAGCAGG CAATCACCCA TACCGAATTC
ACACTGACAG TAGAATATAG GTTCCGCCAT CAGGATGGCT CCTGGCGCTT TCTCGAATCC
ACCGGACGCA ATCTCCTGGC AGACCCCGCC GTGGCTGGCA TTGTGGTGAA TACCCGCGAT
ATTACTGACC ATAAACGCAC CGAATCCGCT CTTCGCCAGG CTGAAGAAAA ATATCGCAGC
ATCTTTGAAA ATGCAGTGGA GGGTATTTTT CAATCCTCTC CGGAAGGCCG ATATATTCGG
GTCAACCCCG CCCTGGCCCG CATGTATGGT TACGATTCCC CGGAGGAGTT ACTCGCCCAC
CTGACCGATA TTGGCCGTCA GCTTTACGTC GATCCAGAGC GGCGAGCAGA ATTTCAACGC
TTGATTGACC AGCAGACGAT CGTGACCCAT TTTGAAGCCC AGGTCTATCG ACGCGACGGC
AGTATTATCT GGATCACGGA ACACGCTCGG GCCGTACGAG ATGGGACGGG GAAACTGCTC
TACTACGAGG GCACTGTCGA AAACATCACT GACCGGAAGC GCACGGAACT GCAACTGCTC
CAAACCACCT CGGAGTTAAA GGCCATTTTC CAGGCGTTAC CCGATCTCTA TTTTCGTGTA
GACCACGACA GTACAATTCT GGACTTCAAA GCGGGGCGGC GCACCGATCT TTATCTGGAG
CCGGAGGAGT TTCTGGGACG GCGAATGACC GACGTTTTAC CGCCTCCGGT GGCCACACAA
TTCAGCGGGG CGATCGACCG GATTTTATCT GGGGAAGCAC GGGTCGATCT GGAGTATGTT
CTGCCCATGC CAGATGGGGA GCAAACCTTT GAGGCCCGCC TTCTTCCCCT TCTGCAGACC
CAGATCATCG CCGTGATCCG CAATATCACT AAGCGCAAAC GGGCAGAAAA TGAACTCCGG
CAGGCTGAGG AAAAATATCG CAGCATCTTT GAAAATGCCA CCGAAGGCAT CTTCCAATCC
AGCCCCTCGG GTAGCTACAT CAGTGCCAAT CCAGCCCTGG CCAGAATCTA TGGCTACGAT
TCCCCCCAGG AACTCCAACA CCACCTGACC GATATCGGTC GCCAGCTTTA CGTCAACCCC
GATCGCCGCC AGCAATTTGT CCATTCCATT CTTGAGCAAG GCCAGGTGAC CGACTTTGAA
TCCCAGGTCT ACCGCAAGGA TGGTTCAGTG ATCTGGATTT CTGAAAATGC CCGTGCTGTC
CGCGATCGGC AGGGAAACAT TCTTTACTTT GAAGGTACCG TTGAAGACAT CAGTGCCCGC
AAACAGGCCG AACTGACCAT CCATTACCAG GCTTTCCACG ATCTGCTCAC CGGCCTGCCC
AACCGAGCTC TGTTTGACGA TCGTCTCAAT CAGGCCCTGG CAGATGCCCG ACGCTATCAA
CATCTGCTGG CAGTCTTTTT CCTCGATCTA GATCGGTTTA AAGTCATTAA CGATACCCTG
GGCCACGCCA TCGGCGATCA GTTATTGCAA CAGGTTGCCC AGCGCTTGCT CCCGTGCCTG
CGCGAAATCG ATACTATTGC CCGTTGGGGG GGAGATGAAT TTACCCTCCT CTTGCCCCAT
GTGCAAACCC CGGCGGATAG CGTCAAGATT GCTGAACGGT TGCTAGCCAG CTTGAAACCC
CCCTTTAGCC TCAAGGGCCA CAATCTCCAT ATCACCGCCA GCCTGGGCAT CGCCCTCTAC
CCCCACGATG GAGAAGATGG CACCACCCTG CTCCGTAATG CTGATGCTGC CCTGTATCGG
GCCAAGGAAG AGGGACGCAA TGGGCTCTAC TGCTATACAC CAATGCTCAA CTCTCGCGGC
CATGAACTGT TGGCGCTAGA GAGTGAACTG CACAAAGCCT TAGAGCAGCA GGAATTAGAC
GTTTACTATC AACCTCAGAT CAATGCGGCC ACCGGAGAAA TTCTACGTCT GGAAGCCCTG
GTGCGCTGGC AGCATTCCCA ACTGGGCCTG GTTTCTCCTC AAACCTTTAT TGGATTGGCA
GAAGAGAATG GTTTGATTAT GCCCATTGGC CAGTGGGTGC TGGAAACGGC CTGCCATCAA
TGCCGCCAAT GGCAAGCGCG GGGCTTTCCC GGTCTGGGGA CTGCAGTCAA TCTCTCTGTG
CGGCAATTTC AACAACCTCA CCTGGTCCAG CAAGTGGCTG AAACCCTACA GTATACGGGG
CTGGCCGCCG ATCGGCTGGA GCTGGAAATC ACCGAAACCA CCGCCATGCA AAATGTGAAT
CTCACCCGTA CCCTCCTGCA TGAGCTGGAT CAGATGGGGG TGGGCATTGC CCTGGATGAT
TTTGGCAGCG GGTATTCTTC CCTCAACTAT CTCCGTCAGT TTCCGCTGCA TTCGATTAAG
ATTGATCGCA CCTTTATCCA GGAATTGCCC TACTCGGTTC AGGATCAGGC GATCGTCAAA
GCAGTCATTG CCCTGGGACG AGGTTTAAAT CTCAGCGTGG TGGCAGAAGG GGTAGAATCC
CAGTCCCAAC TGAAGGTTTT ACGCTCCCTC GGCTGTGACA TTATCCAGGG TTACTTCTTT
GGCCCGCCGA TCGCCGCTGC CGCCATGACT CAGCTCCTGG AGCAATGTAC CTGTAGCGAG
AGTGGCCAAC CCCTGTTGCC CCAGCCCAAA GCAATCCTCC ATTGA
 
Protein sequence
MSKAQAIQSE DKEFLAYTSR FLRLIDSLPG IVFSGSNDAQ WSMQYLSRGC LALTGYSSDE 
LAQKGGEAFN AITHPEDLPR VLATLSAAIA SSEPYEVEYR IRTKSGEEKW VLEKGHRVLD
EDQCTCGIEG FITDITPLKR AEAALIQAEA RWRSLIHNSS DLITILDAQG TVLYHSPVLK
RLLGYHPQNC EGKSAFGLVH PQDRKQVQQT FQQAITHTEF TLTVEYRFRH QDGSWRFLES
TGRNLLADPA VAGIVVNTRD ITDHKRTESA LRQAEEKYRS IFENAVEGIF QSSPEGRYIR
VNPALARMYG YDSPEELLAH LTDIGRQLYV DPERRAEFQR LIDQQTIVTH FEAQVYRRDG
SIIWITEHAR AVRDGTGKLL YYEGTVENIT DRKRTELQLL QTTSELKAIF QALPDLYFRV
DHDSTILDFK AGRRTDLYLE PEEFLGRRMT DVLPPPVATQ FSGAIDRILS GEARVDLEYV
LPMPDGEQTF EARLLPLLQT QIIAVIRNIT KRKRAENELR QAEEKYRSIF ENATEGIFQS
SPSGSYISAN PALARIYGYD SPQELQHHLT DIGRQLYVNP DRRQQFVHSI LEQGQVTDFE
SQVYRKDGSV IWISENARAV RDRQGNILYF EGTVEDISAR KQAELTIHYQ AFHDLLTGLP
NRALFDDRLN QALADARRYQ HLLAVFFLDL DRFKVINDTL GHAIGDQLLQ QVAQRLLPCL
REIDTIARWG GDEFTLLLPH VQTPADSVKI AERLLASLKP PFSLKGHNLH ITASLGIALY
PHDGEDGTTL LRNADAALYR AKEEGRNGLY CYTPMLNSRG HELLALESEL HKALEQQELD
VYYQPQINAA TGEILRLEAL VRWQHSQLGL VSPQTFIGLA EENGLIMPIG QWVLETACHQ
CRQWQARGFP GLGTAVNLSV RQFQQPHLVQ QVAETLQYTG LAADRLELEI TETTAMQNVN
LTRTLLHELD QMGVGIALDD FGSGYSSLNY LRQFPLHSIK IDRTFIQELP YSVQDQAIVK
AVIALGRGLN LSVVAEGVES QSQLKVLRSL GCDIIQGYFF GPPIAAAAMT QLLEQCTCSE
SGQPLLPQPK AILH