| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3142 |
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| Symbol | |
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| ID | 7289077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | - |
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| Start bp | 3114437 |
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| End bp | 3117598 |
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| Gene Length | 3162 bp |
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| Protein Length | 1053 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643586117 |
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| Product | type I site-specific deoxyribonuclease, HsdR family |
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| Protein accession | YP_002483831 |
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| Protein GI | 220908520 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.311039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGT TCACCACTGA AGACCAGATC GAAGCCTATA ACCTCGAACT GCTTGATGCC
CTTGGTTATA GCTACAAACA CGGCTCTACG ATCGAACCTG AAGGAGCTGC ACCCGAACGG
CAAAGCTTTG GTGATGTGCT GCTCAAAGAC CGGCTGAATG AGGTCATTGG GCGGATCAAT
TCCCACATTC CCCCTGAGAT TCGCCAGCAA GCCCAGCGGG AACTGCAAAA CATCGCCAGT
CCTGACCTGA TCAGCAACAA CGAAGCCTTC CACCGCTACC TCACGGAGGG TATCACGGTT
GAATACACCA AGAATGGCGA AATCAAAGGT GAGCAACTCT GGCTGATTGA CTGGGACAAT
CCCGACAATA ACGAATTTCT CGCCGTCAAC CAGTTCACCG TCATTGAAGA TAACCACAAT
CGCCGCCCCG ATATCATCCT CTTTATTAAC GGGCTGCCCC TGGTAGTGAT TGAACTCAAA
AATGCCGCTG ATGCCAAAGC TAACCTGCAA GCTGCCCATA ACCAATTGCA AACCTACAAA
CGCGAGATTC CCAGCCTCTT TACCTACAAC GCCCTGCTGG TGATCTCCGA TGGCATCTCT
GCCCGTGCCG GTTCCCTCTC TGCGCCCTAC AGCCGCTTCA GCCAGTGGAA ACGCAAACTC
CCCAACGGCG AGATTGATAA TAACCCCGAC ACCAACGAAC TGGAAATTCT CACCCAGGGG
ATGCTCAATA AAGCCACCCT GCTTGACCTG ATCCGACACT TCACCGTTTT TGAAAAGGTC
AAGATTGTAG ACCCCAACAC CGAAGTCGTC ACCCTGCAAA CGATTAAGAA GCTAGCCGCC
TATCACCAGT ATTACGCCGT CAATTTAGCG GTTGAGAGTG TCATCGCTGC CACCCGATCC
AACTATCGCG GCGGGGTCGT GTGGCACACC CAGGGCAGCG GTAAGTCCCT CTCAATGGTG
TTTCTCAGCG GTAAGCTGGT GCTGGCACTG GATAACCCCA CGATTGTTGT CCTCACCGAT
CGCAACGACC TGGACGATCA ACTCTTCGAT ACCTTTGCCG GGTGCCGCCA ACTGCTCCGC
CAAGATCCCC AACAAGCGGA TAACCGGGAT GCGGTGCGGG AACTGCTCAA CGTCGCCTCC
GGTGGCATCA TCTTTACCAC CGTGCAAAAG TTTGCCCCGG TCGAAGGGGA AACCCTGTAT
CCCAAGATTA GCGATCGCAC CAACATCGTT GTCCTGGCTG ATGAAGCTCA CCGCAGCCAA
TACGGATTCA AAGCCAAACA GGTCAACATC AAAGACGAGC AAGGCAATGT AGTTGGAAAA
CAGACCCGCT ATGGTTTTGC CAAATACATC CGCGATGCCC TGCCCAAGGC CACCTTCGTT
GGTTTCACCG GCACCCCCGT CGAACAGACC GACAAAAACA CCCCCCAGGT TTTTGGCAGC
TATATCGACG TTTACGACAT TGCCCAGGCA GTCGAAGATG GAGCAACCGT CCCGATTTAC
TACGAAAGCC GCTTGGTCAA AGTAGACCTG GACGAACATG GGCGGGAATT GCTGGACGAA
CTCGACGAAG ACCTCAGCTT TGAAGACCTG GGTAGTACTC AGCAAGCCAA GGCACGGCAA
ACCCAACTAG AAGCGATCGT CGGCTCCACC CAACGCCTGG AAACGATCGC CCAGGACATC
ATCACCCACT TTGAGAAACG CCAAACCGCC AATCGGGGTA AGGGCATGAT CGTTACCCTC
AGCCGCCAGA TTGCCGCCAA CCTCTACGAC AACATCATCA AACTTCGTCC TGGTTGGCAT
AGCGACGACC TGAACAGCGG GAAGATCAAA GTCGTCATGA CTGCCAGTGC CTCCGATGCA
GGTAACCTCG TTGCACACCA CACCAGCAAG AAGGATCGTC AAGTCCTGGC GCAACGCCTC
AAAGACCCCG ACAATGACCT GGAACTCGTC ATCGTCTGCG ATATGTGGCT CACCGGGTTT
GATGCCCCCT GCCTCCACAC AATGTACATC GACAAGCCCA TGAAGGGGCA TAACCTGATG
CAGGCGATCG CCCGGATCAA CCGTGTCTAC TTCGAGAAGC AGGGTGGCTT GATTGTGGAT
TACTTAGGTG TGGCCCAAGA ACTCAAAAAT GCCCTCTCCT TCTACTCCCA GAGCGGCGGT
AAAGGCGACC TGACCGTCGA TCAAGACGTA GCGATCGGGT TACTGCTGCG AACTCTGGAA
GTCGTCGAAG GCATCATGGC GGAATTCAAC TATCAGCCCT ACTTCACTGC AAGCACTGGG
GATAAACTCA ATATTCTCAA ATCCGCTACC AACTATGTGG CTGATCCACA AATCAAAGAC
CGATTCCTTG ATGCGGTGAC GGCCCTCTCG AAAAGCTACG CCCTCATCGC CCATCACCCA
GAAGCGATCG CCCAAGCTGA GAAAATTTCC TTCTTCCAGG CGATTCAAGC CAGCCTCCGT
AAACTTGAAC CCAGTGACGG CAGCCTCAGC AATGCTGACA TCGAAACCGC CATTCGTCAG
GTGGTCGATC AAGCTCTTGT CTCCGATACC GTCATCAACA TCTTTGACGA AGCAGGCATC
AAAAGCCCGG ATGTCTCGGT GATCTCCGAC GAATTCCTGG CAGATGTCGA GGGGATGGAG
CATAAAAACC TGGCGGTGGA ACTACTCAAA CGCCTGCTCC GGGATGAAGT CAAAGCCCAG
CGTCGCACTA ACCTCGTCCG CAGCCGCCAA CTTGCCGAAA TGTTGGAAGA ATCCCTCCGA
CGCTATCAAA ATCAGGTGAT CAGCGTGACG GAAGTGATCC AGGAGCTGAT CAGCCTCTCC
AAAGATGTCC AGGCTGCGAA ACAACGGGGT GAAGAGTTGG GGCTAGAACC CTACGAACTC
GCTTTTTACG ATGCCCTGTC CCAAAATCAG AGTGCCAGAG AGGTGATGGG TCAGGACAAA
TTACGGGAGC TAGCGATCAC CCTGGTGGTC AGAATCCGCA AGAATGCCAC CATTGACTGG
AATCTCAAAG AAAGTGTCCG CGCCAGAATG AAGGTCATGG TCAAACGCCT ACTCCGAGAA
TATGGCTACC CACCTGACAT GCAGGCCCTC GCGATCGAGC TAGTGCTGGA GCAAGCTAAG
GTGTTCACGG AATTTGAAGT TGAAACGAAT TGCTCCAACT AA
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| Protein sequence | MSKFTTEDQI EAYNLELLDA LGYSYKHGST IEPEGAAPER QSFGDVLLKD RLNEVIGRIN
SHIPPEIRQQ AQRELQNIAS PDLISNNEAF HRYLTEGITV EYTKNGEIKG EQLWLIDWDN
PDNNEFLAVN QFTVIEDNHN RRPDIILFIN GLPLVVIELK NAADAKANLQ AAHNQLQTYK
REIPSLFTYN ALLVISDGIS ARAGSLSAPY SRFSQWKRKL PNGEIDNNPD TNELEILTQG
MLNKATLLDL IRHFTVFEKV KIVDPNTEVV TLQTIKKLAA YHQYYAVNLA VESVIAATRS
NYRGGVVWHT QGSGKSLSMV FLSGKLVLAL DNPTIVVLTD RNDLDDQLFD TFAGCRQLLR
QDPQQADNRD AVRELLNVAS GGIIFTTVQK FAPVEGETLY PKISDRTNIV VLADEAHRSQ
YGFKAKQVNI KDEQGNVVGK QTRYGFAKYI RDALPKATFV GFTGTPVEQT DKNTPQVFGS
YIDVYDIAQA VEDGATVPIY YESRLVKVDL DEHGRELLDE LDEDLSFEDL GSTQQAKARQ
TQLEAIVGST QRLETIAQDI ITHFEKRQTA NRGKGMIVTL SRQIAANLYD NIIKLRPGWH
SDDLNSGKIK VVMTASASDA GNLVAHHTSK KDRQVLAQRL KDPDNDLELV IVCDMWLTGF
DAPCLHTMYI DKPMKGHNLM QAIARINRVY FEKQGGLIVD YLGVAQELKN ALSFYSQSGG
KGDLTVDQDV AIGLLLRTLE VVEGIMAEFN YQPYFTASTG DKLNILKSAT NYVADPQIKD
RFLDAVTALS KSYALIAHHP EAIAQAEKIS FFQAIQASLR KLEPSDGSLS NADIETAIRQ
VVDQALVSDT VINIFDEAGI KSPDVSVISD EFLADVEGME HKNLAVELLK RLLRDEVKAQ
RRTNLVRSRQ LAEMLEESLR RYQNQVISVT EVIQELISLS KDVQAAKQRG EELGLEPYEL
AFYDALSQNQ SAREVMGQDK LRELAITLVV RIRKNATIDW NLKESVRARM KVMVKRLLRE
YGYPPDMQAL AIELVLEQAK VFTEFEVETN CSN
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