Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_3041 |
Symbol | |
ID | 7288974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 3016811 |
End bp | 3019663 |
Gene Length | 2853 bp |
Protein Length | 950 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643586019 |
Product | ABC transporter related |
Protein accession | YP_002483736 |
Protein GI | 220908425 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.499618 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTGATCA AACAACTGCT TTTAATTGAT GATCAGCAAT ATTGGCAAAT AGAAAAAGGT GCCTTAGCCC TGTTTGCCAC GCCGATCGCC GCCGGGGAAC CGGAAGGGCA ACGTCATTTC CTGACAACTT TAGGTGGTGG GCAGTTGCTC TTTGGTGCGG CTCCCTGGAC TGACCAGGAG GGGCATCAAT GGGGCTTGCT GGCGGTAGCG ATCGAGCCAA CATCAGTGAT TGCCATGAGG GTCATCGATC GCCCCCAATC TATCGATGCA GATGCTACTG GCTGGCTGCG GGGGCTGACA GAATGGCTGG AACAACTTAT CCAGGCTCTA TCCCCACAGT GTTTACCCTC CCGTCCAGAC CATTGTCAAG TAGTCAAGGG AGCGCACTAT CTATCCCTGC TCCTTGGCGA AGCAGTAGAA CCGCCAATCT CTGAACTGAT CTGGCTCAAA CTCCAGCGAG GACAGTCCCA TCTACTGGAT CAGCCCTCCC TCGTCCTCAA CCCAAATTCG CCCCCCTTTC CCCTGGTTTA TCCCTTCTGG GTGCAAGCCA GCGAGGACGT TGAACTCTCC ACCAGCGCGG ATTTAGAAAC CAGCTTCACA GCCAGCCTGG CCCTCTTTCA CAGCTATTTT GCCACTCTGC TCCTCCAGAG CCTCCAGCAG CAAGAGCAAG CCGACTACGA TCGCTTTCAG GATCGGCAGC AGCTGAATCA GCAGTCCCTC AGCCTCGCCC TGCAAGACCT GACAACCGTG CTGCAGCCCC AAGTCCGTCC CCCTAGCCCA GCCGGTGATC CCCTGCTGAT GGCTGCCGGA GCCGTGGGGC AAGCCATGGG GTTAAGTATT AAGCCACCGT TGCCATCCCA ACAGGGCATG ATTGACCCGA TAGCGGCGAT CGCCCAGGCC TCCCAAATTC GAGTGCGGCA AGTCCGGCTG GAAGGAACCT GGTGGCAGTC AGAGTCCTCT CCCTTGCTGG GTTTTACCCT GGAGGGGTTG CCCGTAGCCC TGTTGCCGGT GGTCAACAAA CGCTTTCACC TCTATAACCC GGCTACCGAA GATCGCCCAC TCATTGATGC CACAATTGCC GGCGGCCTCT CCCGCGATGC CTATCTGTTC TACCGCCCAC TCTTAGGAGT TGTTAAAAGC CCTTTACAGT TATTTCAGTT TGCTCTGCGC GGTCATGAGT GGGATCTGGT CTGGGTGCTG GTTGTTGGAG TTCTGGGCAC CCTGCTGGGT ATGGTCATCC CCCAGGCAAC AGCTTTTTTG ATCAATGATG CGATTCCCGA TGGTGATCGC CTGTTGCTGG GGGAATTGGG GTTAGCCTTA TTTGCCGCTG CCGTGGGACA GTCTGCTTTT CAGCTCTCTC AGGGGATTCT CACTCTGCGG GTGGAAAATA CCGCCGATGC CACCCTCCAA CCAGCCATCT GGGATCGACT CTTACGCTTG AATCCGGGGT TTTTCCGTCT TTACTCCTCC GGTGATCTGC TGAATCGGGT GCTGGCGGTC AGTCAAATCC GCAAGAAACT CAGTGGTGCG ACCCAGAGAA CCCTGCTCAG TGGTATTTTT GCCCTACTCA ATCTCGGCTT GATGGTGGTG TATAGCTGGC AATTAACCCT GGTCGGCATG GGCATTTCGC TGCTGGCTAT TCTGGTCACA GTGGTTTCCG GGCTGTTATT GGTGCGAAAG TCCCGCATCC AGCAAGAATT AGAAGGGCAG ATCAATGGGC TAACCGTGCA GTTGATTAAC GGTGTGGTCA AGCTGCGAGT GGCCATGGCC GAGGAACGGG CCTTTGCGGC CTGGGCGCAA CAATACAGTC AACGCATCCG CCTCAAAGCG CTCTTCCAGC GGATCAATGA TGCGGTAACA GTGTTTAATG ATGCTCTCTC GCTGGTGACA TCGGTGCTGC TGTTCTGGTT TGCAATCCTG TTTATCCAGA TGGAGCAGGC GACGGGGGGA GGACTGAATG TGGGTAGTTT CCTGGCTTTC AATGCGGCTT TTGGCATTTA CATCAAGGGG GTGACGGACC TCAGTAATAC CCTGACGGAT ATTCTCGATA TTGTGCCCAC CTGGGAACGG GCTGATCCAA TCCTACGCAG TGAAACCGAG ATCGATATCA ATAAAGCCGA TCCGGGTCTG CTCAGGGGAG GGGTAGTCCT GGAGCATGTC ACGTTCCGTT ATCGCCCGGA TGGACCCCTG ATTCTAGAGG ATGTCTCGCT CCAGGCCAGA GCCGGAGAAT TTATTGCCAT TGTCGGCCCC TCTGGAAGCG GTAAATCAAC GCTGTTTCGG CTGCTGCTCG GGTTTGAAAC CCCACTATCG GGAAGTATTT TTTATGACGG ACAGGATCTC AAGGGTTTAA ACGTGCAGGC TCTGCGGCGG CAGTTGGGGG TCGTGCTCCA GAATGGCCGG ATCGGTTCCG GTTCGATTTT TAGCAATATT ACCGCCGGGG CAGTGGTTTC TCTGGATCTG GCCTGGGAGG CGGCGCGGAT GGCCGGTTTT GCAGAAGATA TCGAACAGAT GCCAATGGGG ATGCATACGG TGATCAGTGA AGGCGGCACG AACCTCTCCG GCGGCCAACG GCAACGGCTA CTGATTGCCC GGGCGATCGT CCAGAAACCC AAAGTAATTC TTATGGATGA AGCCACAAGT GCTCTGGATA ACCGCACCCA GGCGATCGTC ACGGCAAGTC TGGATAAACT CCAGGTGACA CGGATTGTGA TTGCCCACCG CCTCAGTACG ATTCGCAATG CCGATCGCAT TTACGTCCTG GAAGCCGGAC GGGTCGTGCA GGTGGGAAAA TTCGAGGAAT TGATTGCTCG GGAGGGTTTG TTTGCTCGAT TAGTAAAGCG GCAAATGGAA TAA
|
Protein sequence | MLIKQLLLID DQQYWQIEKG ALALFATPIA AGEPEGQRHF LTTLGGGQLL FGAAPWTDQE GHQWGLLAVA IEPTSVIAMR VIDRPQSIDA DATGWLRGLT EWLEQLIQAL SPQCLPSRPD HCQVVKGAHY LSLLLGEAVE PPISELIWLK LQRGQSHLLD QPSLVLNPNS PPFPLVYPFW VQASEDVELS TSADLETSFT ASLALFHSYF ATLLLQSLQQ QEQADYDRFQ DRQQLNQQSL SLALQDLTTV LQPQVRPPSP AGDPLLMAAG AVGQAMGLSI KPPLPSQQGM IDPIAAIAQA SQIRVRQVRL EGTWWQSESS PLLGFTLEGL PVALLPVVNK RFHLYNPATE DRPLIDATIA GGLSRDAYLF YRPLLGVVKS PLQLFQFALR GHEWDLVWVL VVGVLGTLLG MVIPQATAFL INDAIPDGDR LLLGELGLAL FAAAVGQSAF QLSQGILTLR VENTADATLQ PAIWDRLLRL NPGFFRLYSS GDLLNRVLAV SQIRKKLSGA TQRTLLSGIF ALLNLGLMVV YSWQLTLVGM GISLLAILVT VVSGLLLVRK SRIQQELEGQ INGLTVQLIN GVVKLRVAMA EERAFAAWAQ QYSQRIRLKA LFQRINDAVT VFNDALSLVT SVLLFWFAIL FIQMEQATGG GLNVGSFLAF NAAFGIYIKG VTDLSNTLTD ILDIVPTWER ADPILRSETE IDINKADPGL LRGGVVLEHV TFRYRPDGPL ILEDVSLQAR AGEFIAIVGP SGSGKSTLFR LLLGFETPLS GSIFYDGQDL KGLNVQALRR QLGVVLQNGR IGSGSIFSNI TAGAVVSLDL AWEAARMAGF AEDIEQMPMG MHTVISEGGT NLSGGQRQRL LIARAIVQKP KVILMDEATS ALDNRTQAIV TASLDKLQVT RIVIAHRLST IRNADRIYVL EAGRVVQVGK FEELIAREGL FARLVKRQME
|
| |