Gene Cyan7425_3001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_3001 
Symbol 
ID7288933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp2973105 
End bp2974181 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content50% 
IMG OID643585979 
Productcalcium/proton antiporter, CaCA family 
Protein accessionYP_002483697 
Protein GI220908386 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA AAGAAAAAAT TCTGTTGGGG ATGCTAGCCT TTATTCCCCT GACGATCGCC 
GCTGACTGGC TCAAGTTCAA CCCCTTGCTC ACCTTTGTCT TATCGGGTTT AGCCATTATT
CCTCTAGCCG CCTGGATTGC CAATTCAACC GAAGAAATTG CCATGGTGAT TGGGCCAACC
CTGGGGGGAT TAATGAATGC GACCTTCGGC AATGCCACGG AAATGATTGT TGCCATTGTC
GCCCTGCGAT CGGGACTAGT GGAGGTTGTC AAAGCCAGTT TAACGGGTTC GATCATTGCT
AACCTGCTGC TGGCTATGGG GTTGGCCATT ACCCTGGGCG GATTTCGATT TAAAGAGCAA
ACGTTTCAGC CCGCCGTAGC CCGGATCAAC TCTTCTTCCC TCACCCTGGC GATCATTGTC
TTACTAACTC CGACGGCGAT TCAGCTGACC TCTCCCAAAA TGGATCAAGC CCGAATTGAT
CACTTTTCCT ACGCAGCCGC CATTCTGCTG CTGGCATTTT ATGGTTTGAT GTTGCTGTTT
TCAATGAAAA CCCATCGCCA TCTCTACCTG CTGGAAGAAT CAGAGGCCGA TGTTATGGGA
GAAGACGAGG GACATGGGGT TAACCTCAAA TTGCAAATCG GTATCCTTTT GATCAGCACC
CTCGTCCTGG TCTTTGTTTC AGAGATCTTG GTTGACAGTT TAGAAAAAGC CATTGCTAGC
GTGGGACTGA CGGATCTGTT TACCGGCGTG ATCCTGATTC CTATTTTTGG TGGTTTCGTT
GAATATATCA CCTGCATTAC TTTTGCTGTA AAAAACAAAA TGGAAGTGGC GGTGGCGGTG
GCGATCGGCT CCAGTCTCCA AATTGCCCTG TTTGTGGCTC CGGTGCTGGT GCTGGCGGGC
TGGGTGCTGG GTCAACCGAT GAACCTGGAT TTTAATCCCT TTGAATTAGT GGCTGTTGCC
ATGGCTATAG TGATTACGAA CTCGATCAGT AACGATGGTC GCTCTAACTG GCTGGAAGGG
GTTTTACTGC TGATCACCTA CGCCGTTCTG GGAGTGGCCT TTTTCCTGCA TCCCTAG
 
Protein sequence
MSMKEKILLG MLAFIPLTIA ADWLKFNPLL TFVLSGLAII PLAAWIANST EEIAMVIGPT 
LGGLMNATFG NATEMIVAIV ALRSGLVEVV KASLTGSIIA NLLLAMGLAI TLGGFRFKEQ
TFQPAVARIN SSSLTLAIIV LLTPTAIQLT SPKMDQARID HFSYAAAILL LAFYGLMLLF
SMKTHRHLYL LEESEADVMG EDEGHGVNLK LQIGILLIST LVLVFVSEIL VDSLEKAIAS
VGLTDLFTGV ILIPIFGGFV EYITCITFAV KNKMEVAVAV AIGSSLQIAL FVAPVLVLAG
WVLGQPMNLD FNPFELVAVA MAIVITNSIS NDGRSNWLEG VLLLITYAVL GVAFFLHP