Gene Cyan7425_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_3000 
Symbol 
ID7288932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp2971631 
End bp2972731 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content51% 
IMG OID643585978 
Productcalcium/proton antiporter, CaCA family 
Protein accessionYP_002483696 
Protein GI220908385 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.555455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCA AGGATGCCTT TCTCCTGCGG ATGCTGTTAC TGGTTCCCCT TGCCCTTACG 
CTGCATTGGC TGGGAGCTGA TCCCCTCTAT GTCTTTATTG TCTCTGGTCT AGCCATCATC
CCGCTGGCTG CCTGGATTGC CAACTTTACA GAAGCGATCG CGACGGAGAT TGGTCCCGCC
CTGGGTGGAT TGCTCAATGC CACTTTCGGG AATGCGACGG AACTGGTGAT TTCGATCGTC
GCTCTCAAAG ATGGGCTGGT GGATGTGGTC AAAGCCAGTT TGATTGGTTC CATTATTGCC
AACCTGCTGG TGGGACTGGG GGTCACCTTT CTGCTGGCTG GTTGGCGGGG ACAGCAAGAG
TGTTTACCTC CCAACATGGC CCGCTCTAAC GTGGCTCGGA TCAATGCGGG TTCGCTCAAC
CTGGCCGTGA TGTTTCTGCT GATTCCGGGC GCCTTGCAGT TGACCTCAAG AGTACTGGAA
GTCGAGATGG TGCATAATCG ATTTTCCTAT GTTGCTGCCA TCATGCTGCT GACGTTCTAC
GGGTTGATGC TCCTGTTCTC CATGAAAACC CATCGTTACC TTTATGAACA GAGCGAGGAT
GCCGACCCAG AAAACTATGG CAGTGAAGCC CTGGGACAGC GATACAATCT CTGGTTAAAT
GCAGGGCTAC TACTTGCCTC CACGATCGTC CTGCTCTTTG TTTCTGAAGC CCTAGTCAGT
AGTTTGCAGG AAGCCATGCC TGCCTTTCAT CTCAATGCTC TCTTTATCGG TGTAATCATT
ATTCCGGTCT TTGGGGCCGC AGTTGAATAT ATTACCTGTG GTATCTGCGC CCTAAAAAAC
AAAGTGGATC TGGCAGTTTC CATTGCGATG GGGTCAAGTT TGCAAATTGC CCTCTTTGTT
GCTCCCCTGT TAGTCATAAT TGGCTGGGTT CTGAATCAAC CCATGAATCT TAATTTCAAT
ACCTTTTCTG TGGTTGCAGT CAGTATTGCC GTAGTGATGA CGAACTCAGT CAGTACGGAT
GGGCGAGCCA ATTGGCTAGA AGGAGTGTTA CTCCTGATGA CCTATGGAAT GTTGGGAACG
GCGTTCTATT TGCATCCCTG A
 
Protein sequence
MSRKDAFLLR MLLLVPLALT LHWLGADPLY VFIVSGLAII PLAAWIANFT EAIATEIGPA 
LGGLLNATFG NATELVISIV ALKDGLVDVV KASLIGSIIA NLLVGLGVTF LLAGWRGQQE
CLPPNMARSN VARINAGSLN LAVMFLLIPG ALQLTSRVLE VEMVHNRFSY VAAIMLLTFY
GLMLLFSMKT HRYLYEQSED ADPENYGSEA LGQRYNLWLN AGLLLASTIV LLFVSEALVS
SLQEAMPAFH LNALFIGVII IPVFGAAVEY ITCGICALKN KVDLAVSIAM GSSLQIALFV
APLLVIIGWV LNQPMNLNFN TFSVVAVSIA VVMTNSVSTD GRANWLEGVL LLMTYGMLGT
AFYLHP