| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_2818 |
|---|
| Symbol | |
|---|
| ID | 7288752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 2775655 |
|---|
| End bp | 2777964 |
|---|
| Gene Length | 2310 bp |
|---|
| Protein Length | 769 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643585806 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002483525 |
|---|
| Protein GI | 220908214 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0945314 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCC AGTCCCTCAC CCTCTCAGAT CATCAACTTT CAAGTTTGAA ACAACCTTCG
ATCCACACCT TAAATCAGGT GCAACCCCAT GGGGTGATTC TGGTCTTACA GGAGCCAGAT
ATGAAGGTTT TGCAAGTCAG CCGTAATGTC TCCAGGTTGT TTGGGCGCTC TGCTGAGGAT
TTGGTTGGGA AAAACCTTGA AGATATCTTT GATGCCTACC AGGCCGATAA CTTACGGTTG
GGGCTGGCCG CTGAAAACCT GGATGTGATG AATCCCACTA AAGTTTGGGT GCGCCGAGAC
AGAGGGGATT ATGGGGTGTT TGACGCGATC GCTCATCGCA GTGCAGATGG CTTTGTCGTA
CTGGAATTAG AGCCGTCTCT GCTGCAAGAC AATATCCCGT TCTTGGGCTT TTATCACCTG
GCTAAAGTCT CGATCAATCA ACTTGAAGTT GGGGCGAATT TAAACCAATT TTTTCAAATC
ATTGTGCAAG AAGTGCGAAA AGTGACGGGT TTCGATCGGG TCATGCTCTA TCGCTTCGAT
CGGGATAACC ACGGTGAGGT GATGGCAGAA GACAAAATTC CTGAGCTGGA ATCCTATTTG
GGACTGCACT TTCCCGAGTC AGATATTCCC CAACCCGCCC GCAAAATGTT TGTCTCCAAC
TGGATTAGAA CCATTCCAGA TGCCACAGCT GAGCCGGTGG ATCTCTATCC CGCCTTGAAT
CCTCAAACCC ATCAGCCCAC GGACCTCACC CTGTCCATTC TGCGTAGTCC CTTCCCCTGT
CACCTGGACT ACCTGCACAA TATGGGGGTT GGCTCCTCCC TCACCATCTC CTTAATGAAG
GATCAAAAAC TGTGGGGATT GATTGCCTGC CACCACCGCA CCCCCAGACA AATTCCCTAC
GAACTGCGCA AAGCCTGTGA ATTCTTGGGA CGGGTCATTT TTGCTGAAAT TGCCAATCGG
GAAGAGGAAG CAGATCATCA CTACCGGATG CAATTATCCC AGGTGCAAAC GACTCTGATC
AACGCCATGT CGCGGCAGGA CAATTTTATT GATGCACTGG TGCAGGGCGA CCCGAATTTG
TTGGATTTAG CCAATGCCTC CGGGGCCGCT GTCTGTTTTA ATGGGCGCTG GAAGACCGTT
GGCCGTACCC CCACTGAAGA AGAGCTGACC TATCTGGCCC AGTGGTTAGG CAAAAATGTG
TCTGAAGATG TCTTTTACAC CGATTCGTTG CCCCAGGTCT ACTTTGAAGC CGAGCGGTTT
AAAGATATTG CCAGTGGGTT GTTGGCGATT CCCATTTCCA AGCGGAGTTT TGTGATGTGG
TTCCGTCCTG AGGTCATTCA GACCGTGAAC TGGGGAGGTG ACCCCAATCA GGCCTATGAA
CTCAAGGGAA CGAAAGAACA TCCCCAATTG TGTCCCCGCC AGTCCTTTGC CCTATGGAAG
GAAACGGTGC GGCTGAAGTC CCTACCCTGG CAAGCCGTTG AAGTGAAGGC AGCACTGGAA
TTTCGTAAGG CGATCGTCAA TATTGTGCTG CGGCAGGCAG AAGAACTGGC CTTACTGGCC
CAGGATTTGG AGCGCTCTAA TGCGGAACTG AAGAAATTTG CCTACGTCGC TTCCCATGAC
CTGCAGGAGC CGCTCAATCA GGTGGCCAAC TATGTCCAGC TTTTAGAGAT GCGCTATGAC
AGTGCCCTCG ACGAGGATGC CAAGGAGTTC ATCAACTTTG CCGTGGATGG GGTGGGGTTG
ATGCAAACCC TGATCGATGA CGTCCTGGCC TACTCCAAAG TGGATTTGAA GGGGATTGAG
TGCCAGCTCA CCAAGATGGA GGATGCCCTG ACCCAGGCGA TCGCCAATCT GCGGGGTCGG
ATTAGTGAAA CCCAGGCAAA CGTGACCTAT GATCCGATGC CACAACTGGT GGCGGATGGC
ACCCAACTGA TGCAGTTGTT CCAAAACCTG ATTGGCAATG CCATTAAATT CCGTCGCCCT
GACCAACCGC CTCAGATTCA TATCAGCGTG GAGCGGACGG AAGAATGCTG GAAATTTGGC
GTACATGACA ATGGCATTGG CATTGATCCT CAGTTCAGTG ATCGGATTTT TGTGATCTTT
CAACGGCTCC ACACCCGCGA TGAATATCCC GGTTCTGGCA TGGGGCTAGC TATCTGCAAA
AAGATTGTGG AATGCCATCG GGGGCAGATC TGGGTTGAAT CTGAACTCGG TCAGGGTGCA
ACATTCTACT TCACATTGCC CGTAGGAGGA CTGGATCCAA ACCATGCCAA CCGCTGGAAG
ACGCAAAACT ATCTTTTTAG TGGAAGATAA
|
|---|
| Protein sequence | MSSQSLTLSD HQLSSLKQPS IHTLNQVQPH GVILVLQEPD MKVLQVSRNV SRLFGRSAED
LVGKNLEDIF DAYQADNLRL GLAAENLDVM NPTKVWVRRD RGDYGVFDAI AHRSADGFVV
LELEPSLLQD NIPFLGFYHL AKVSINQLEV GANLNQFFQI IVQEVRKVTG FDRVMLYRFD
RDNHGEVMAE DKIPELESYL GLHFPESDIP QPARKMFVSN WIRTIPDATA EPVDLYPALN
PQTHQPTDLT LSILRSPFPC HLDYLHNMGV GSSLTISLMK DQKLWGLIAC HHRTPRQIPY
ELRKACEFLG RVIFAEIANR EEEADHHYRM QLSQVQTTLI NAMSRQDNFI DALVQGDPNL
LDLANASGAA VCFNGRWKTV GRTPTEEELT YLAQWLGKNV SEDVFYTDSL PQVYFEAERF
KDIASGLLAI PISKRSFVMW FRPEVIQTVN WGGDPNQAYE LKGTKEHPQL CPRQSFALWK
ETVRLKSLPW QAVEVKAALE FRKAIVNIVL RQAEELALLA QDLERSNAEL KKFAYVASHD
LQEPLNQVAN YVQLLEMRYD SALDEDAKEF INFAVDGVGL MQTLIDDVLA YSKVDLKGIE
CQLTKMEDAL TQAIANLRGR ISETQANVTY DPMPQLVADG TQLMQLFQNL IGNAIKFRRP
DQPPQIHISV ERTEECWKFG VHDNGIGIDP QFSDRIFVIF QRLHTRDEYP GSGMGLAICK
KIVECHRGQI WVESELGQGA TFYFTLPVGG LDPNHANRWK TQNYLFSGR
|
|---|
| |