| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_2804 |
|---|
| Symbol | |
|---|
| ID | 7288738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 2759184 |
|---|
| End bp | 2761319 |
|---|
| Gene Length | 2136 bp |
|---|
| Protein Length | 711 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643585792 |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_002483511 |
|---|
| Protein GI | 220908200 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2202] FOG: PAS/PAC domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0770283 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAG CTGCTTCTCA CACAAACCGG CAATCCCCCC AGGTGCTTCA ACAGCCCTCC
AGCTTGAGGG GCCTAGAGAT GAATAATTGT CAAATCGAAG CAAGCTTGAG TGGGAAGGAG
CTCTTAGAAA ACTTTCATGA TAATCCCGCT TTACCTGGTG CCATTCTTAC CCATCAGGGC
AGGTGGTGCG GTTTGATTTC CCGTACTAGA TTTTTTGATA TTCTCAGTTT ATCCAGTGAT
CCTAAAACCA TATTGAAATG CTCTTTAGAG CAGCTTCAGG ATAGCAATGG CCTGCTTAAC
CCGAACCCAA CTATTCTGGC GGCGGATCTA CCGATTCATG AGGCTGTAAA GCGATGTTTA
AACCACTGCT CGGAGAAGCT GAATCAATCC CTGAGCCAAT CCTGGGGAGA ACCGATTGTC
GTTGATCTGG GGGAGGGAAC CTACCAGCTG CTTTCGTTAC AAGATCTGTG GAGCGCTCAA
ATTGACCTCT ATGAAAGCAA CTTACTGCAT CTGAACAAGT GTAACCAAAC CATTACCCAG
CAGAATGAGC AACTCCATGA GGCAATCCAA CAGCTTGAGT CCGTCACTGC AGCCACTGTA
GGGGTTGAAA AGGGAACCTC TTGGTCAGAA CCTCTGGATG AGTTAACGGG GAGAACGGAT
TCATTAGGGC GGCTGGCGCG GAATTTGCTG CAAATTCTTC AAATTGCTAA CCTTCAAGAA
GAGTTTGCTC CAGCCCGAGG GGAGGTGGGA GAACGGGAAC CTACACTGCG GGAACGTCAG
CTCTTAGAAG AGATGGTGCA GCAAATTGAA GCTCGCAACC CATCGTTACC GTTACTCTGG
AAGATTTACA ATCGCCTTCA ACAAACTGAA GCTCGTAACC GGGCCTTGCT CAATGCGATT
CCTGACTTGA TGGTCGAAAT TAGTGAGGAG GGGGTGTATC TTGACTTGAG TGAGGCAAAA
AATAGTCAAT GGCTGGGGAT TGAAGCCAAT AACCTGGTTG GGAAAAATGT CCAAAGGGTT
TTACCAGAAG CCGTAGCCCA GAAATATTTG CTGGCAGTTC AACAGGTGTT AAAAAACCGG
GAACCCCTTA CCCTTGAGCA CGAATTGATC GTAGACGATC GGATCGACAT CTTTGAAGCG
CGGGTCGCAG CCTGTCGGAA TAACTCTGCC CTGTTTCTGG TCCGCAATAT CACCGATCGC
AAGCAGGCCG AATTAGCCCT GATTCAGAGT GAAGAACGAT TTCGCAGTTT GGTCTCCAAC
CTGACCGGGG CCGTCTATCG CTACCACTGT GAGCCCAACT GGACCCTTGA ATACATCAGT
GATGCGATCG AACTGATCTC TGGCTATGGT GCTACTGACT TAATCGCGCA TCAGGTCACT
TACACCCATC TGATTCATCC TGAGGACCGC GATTTAGTCG AGGTGATTAT CAACCATGGC
ATTGTCACTC AGGAACCGTA CATTCTGGAC TATCGCATTG TGCATCAGGA TGGCAGTATT
CGCTGGGTCT ATGAGCAAGG ACAGGCGGTA TTTGACAGCG AGGGCAATCC CCTCTATCTG
GATGGGGTGA TCTTTGATGT GACAGAACGC AAACAGGCGG AAGAAGCCCT GCGCATTGCC
GAAGAAAACT ATCGCAGTAT CTTTGAAAAC GCCCTGGAAG GCATCTTTCA ATCTTCCCCG
GCAGGACGCT ATATCAATGT CAACCCAGCC TTAGCCGCCA TCTATGGCTA CAGCTCCCCG
GCGGAGATGA TAACCTCGAT TACAAACATT GAAGAGCAGC TTTATGTTGA TCCAGAAAAA
CGGCTCGAAT TTCAACAGCT ACTGTCTGCG CAGGGCACTG CCCAGGACTT TGAATACCGA
TCCTACTGCA AAGATGGCAG TGTGATCTGG GTGCAGGTTG ATGCTCGGGT GGTGAGGGAC
AACGAGGGTA ACTTGCTCTA TTACGAAGGA ATCGTTCAGG ATATCAGTGA GCAAAAACTT
CGCGAAGAAG CCTTAAAACG GCAACTGGAA GAACTAAGGA TTGAAATTGA CCAGAAGAAG
CGGGAACAGG ATGTGGCCCT ACTCACCCAG GACAGTTACT TTCAGGAGTT GCAGGCAGAA
ATCGCTCAGG TCAATCTGGA CGAATTCTGG AGTTAG
|
|---|
| Protein sequence | MKSAASHTNR QSPQVLQQPS SLRGLEMNNC QIEASLSGKE LLENFHDNPA LPGAILTHQG
RWCGLISRTR FFDILSLSSD PKTILKCSLE QLQDSNGLLN PNPTILAADL PIHEAVKRCL
NHCSEKLNQS LSQSWGEPIV VDLGEGTYQL LSLQDLWSAQ IDLYESNLLH LNKCNQTITQ
QNEQLHEAIQ QLESVTAATV GVEKGTSWSE PLDELTGRTD SLGRLARNLL QILQIANLQE
EFAPARGEVG EREPTLRERQ LLEEMVQQIE ARNPSLPLLW KIYNRLQQTE ARNRALLNAI
PDLMVEISEE GVYLDLSEAK NSQWLGIEAN NLVGKNVQRV LPEAVAQKYL LAVQQVLKNR
EPLTLEHELI VDDRIDIFEA RVAACRNNSA LFLVRNITDR KQAELALIQS EERFRSLVSN
LTGAVYRYHC EPNWTLEYIS DAIELISGYG ATDLIAHQVT YTHLIHPEDR DLVEVIINHG
IVTQEPYILD YRIVHQDGSI RWVYEQGQAV FDSEGNPLYL DGVIFDVTER KQAEEALRIA
EENYRSIFEN ALEGIFQSSP AGRYINVNPA LAAIYGYSSP AEMITSITNI EEQLYVDPEK
RLEFQQLLSA QGTAQDFEYR SYCKDGSVIW VQVDARVVRD NEGNLLYYEG IVQDISEQKL
REEALKRQLE ELRIEIDQKK REQDVALLTQ DSYFQELQAE IAQVNLDEFW S
|
|---|
| |