Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_2533 |
Symbol | def |
ID | 7288464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 2492132 |
End bp | 2492698 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643585528 |
Product | peptide deformylase |
Protein accession | YP_002483251 |
Protein GI | 220907940 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCCAG CGGTTTTAGT TGAAAAGCGT AAGTTAAAAG AACCCCCGTT GACAATCCAC TATCTGGGCG ATCGGGTGCT GCGCCAACCC TGCAAGCGGA TCAGCCAGGT GAACAACGAA ACCCGGGAAC TGGCCCGAAC CATGCTGCAA ACCATGTACA GTGCGGATGG AATTGGTCTG GCTGCCCCCC AGGTGGGTGT GAATAAACAG TTGATCGTCG TAGATATTCA TCCCGATGAA GCCGCTAACC CTCCCCTGAT TCTGGTCAAC CCCGTGATCC GTGAGTTCAG TCCAGAGGTG AGCCTGGGCC AGGAAGGCTG TCTCAGTATC CCTGGAGTCT ACCTGGATGT GAAACGCCCG GAGATGATCG AAGTTGCTTA TAAAGACGAG CAGGGCCGTC CCCAGGTCTT ATATGCCAGT GGCCTGCTCA GTCGGGCGAT TCAGCACGAA ATTGACCACC TTGGCGGCGT GATGTTCGTT GATCGGGTGG AAAACATGCT GCTCTTGAAT CAGGAATTAA AAGAACACGG ATTCTCTCGC CAGGCCGTCA AACCGATCGC GTCTTGA
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Protein sequence | MAPAVLVEKR KLKEPPLTIH YLGDRVLRQP CKRISQVNNE TRELARTMLQ TMYSADGIGL AAPQVGVNKQ LIVVDIHPDE AANPPLILVN PVIREFSPEV SLGQEGCLSI PGVYLDVKRP EMIEVAYKDE QGRPQVLYAS GLLSRAIQHE IDHLGGVMFV DRVENMLLLN QELKEHGFSR QAVKPIAS
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