| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_2412 |
|---|
| Symbol | |
|---|
| ID | 7288341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 2354792 |
|---|
| End bp | 2356600 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643585406 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002483131 |
|---|
| Protein GI | 220907820 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.485228 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATTC CCCTGCAGCA ATATCGATCG CTCCTGGCAG GCTATCTCAA ACCCCAACAG
GGGCGGGTGA TTGGTCTGGC CATTGCCCTG CTCAGTGGGA TCGGGTTACA AATCATCAAT
CCCCAAATTC TGGCTTATTT CATTGATACG GCGGTAAAGG GGGGAACTCA GCAGGTTTTA
CTGATTCCAG CGGTGGGGTT TATGGCGATC GCCTTGCTCA CCCAGGTCTT CTCGGTGCTA
ACCACCTATC TGGGGGAAAC GGTTGCCTGG ATTGCGACCA ATGCCCTACG GCTTGATTTA
GCGTCCCACT GTCTCCACTT AGATTTATCT TTTCACAAAT GTCATACGCC GGGAGAATTG
CTAGAACGAG TGGATGGCGA TGTCAATCTG CTGGCCCGGT TCTTCTCCCA ATTGATCATT
CATATCCTGG GAAATGCCAT TTTGTTAATG GGGATTCTGG CGGTCCTCTG GTTTGAAAAT
CGATTGGCAG GACTGAGTTT AACCATCTTT GCCCTGGTTG CTCTCTCCCT GTTATTGGGA
TTGCGAGTGA CGGCGATCGC CCCCTATGCT GAATATCTTC AGGTCAGTGC TGAATTCTAC
GGCAGGTTGG TTGAGCACAT TGGCGGGCGC GAGGATCTCC GGGCCAATGG GGCCGTTGCC
TATGTCATGG ATCGCTTTCA CCAAATCTTG CAACGCTGGC TGCCGGTTTA TCAAAAAGCC
CGATTGGCCA GCACGATCCT GTGGTCTACC AGCGTCGGAC TGTTTACAGT GGGTAATGGA
ATTGCACTGA CGCTTGCCGC CTACCTCTGG AACCAGGACC AGATCACCAT TGGCACCGCC
TACCTGATTT TTCACTACAC TAATCTCCTG TCCCAACCGA TCGAACGGAT TCGGGAAGAA
CTGGAACAAT TGCCCCAGGT GGAAGCCAGT ATCTATCGGA TCCGCGAGTT GTCCAGGATT
GAATCCCAAT TAATCCCTCC CGTTGAGGTA GCTTTAAGCC AAGCTCTGGG GACAGAAGCC
TTAGCGGTGG AGTTTGAGCA GGTCTGGTTT TACTATCCGT CCGCAGACTC TCGCGATCCT
GGAACCGCTC AAACCGCCCT CAGCCCGAAC TGGACACTGC AAAATCTCTC CTTCCAGCTT
GAGCCGGGTC AAGTCTTAGG CATTCTGGGA CGTACGGGGA GCGGCAAAAG CACCATTGCT
CGTCTGCTGT TACGGCTCTA CGATCGGCAA TCCGGTCAGA TTTGCTTGGG GGGATGCCCG
ATCACCCATA TTCCTTTAAC AGAATTACGA CAGCGGATTG GGCTGGTGAC CCAGGATGTA
CAGCTCTTTC AAGCAACAGT GCGGGATAAT TTGACCTTCT TTGATCCTCG TATCCGGGAT
GCCGATCTTC TGGAAACCCT TGAGGGGTTG GGGTTAATCG ACTGGTTGCA ATCGCTGCCC
CAGGGACTGA ACACCTTATT GGGAGCCAAC AGTGTTGGGC TTTCGGCCGG GCAGGCCCAG
CTCCTCGCTT TTGTAAGGGT ATTCCTGAAA AATCCGGGTC TGGTGATCCT GGATGAAGCC
TCTTCCCGCC TTGATCCACA GACGGAAGCT TTAATTGAGC AGGCGATCGC CAGGTTGTTG
CAAGGGCGTA CCGGGATCAT TATTGCCCAT CGGCTCCAGA CCGTGCAGCG GGCCGATCAG
ATTCTAATCC TGGATCGCGG GCGGATGGTG GAGTATGGCG ATCGCCTCAC CCTGGCCAGG
CAGGCCCAGT CCCGATATGC CCAACTCCTG CGAACACGAT CGAGGTTCAA CGACGGGTTG
CAGACTTGA
|
|---|
| Protein sequence | MPIPLQQYRS LLAGYLKPQQ GRVIGLAIAL LSGIGLQIIN PQILAYFIDT AVKGGTQQVL
LIPAVGFMAI ALLTQVFSVL TTYLGETVAW IATNALRLDL ASHCLHLDLS FHKCHTPGEL
LERVDGDVNL LARFFSQLII HILGNAILLM GILAVLWFEN RLAGLSLTIF ALVALSLLLG
LRVTAIAPYA EYLQVSAEFY GRLVEHIGGR EDLRANGAVA YVMDRFHQIL QRWLPVYQKA
RLASTILWST SVGLFTVGNG IALTLAAYLW NQDQITIGTA YLIFHYTNLL SQPIERIREE
LEQLPQVEAS IYRIRELSRI ESQLIPPVEV ALSQALGTEA LAVEFEQVWF YYPSADSRDP
GTAQTALSPN WTLQNLSFQL EPGQVLGILG RTGSGKSTIA RLLLRLYDRQ SGQICLGGCP
ITHIPLTELR QRIGLVTQDV QLFQATVRDN LTFFDPRIRD ADLLETLEGL GLIDWLQSLP
QGLNTLLGAN SVGLSAGQAQ LLAFVRVFLK NPGLVILDEA SSRLDPQTEA LIEQAIARLL
QGRTGIIIAH RLQTVQRADQ ILILDRGRMV EYGDRLTLAR QAQSRYAQLL RTRSRFNDGL
QT
|
|---|
| |