Gene Cyan7425_2330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_2330 
Symbol 
ID7288259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp2260493 
End bp2262019 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content55% 
IMG OID643585324 
Productcarotene isomerase 
Protein accessionYP_002483049 
Protein GI220907738 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID[TIGR02730] carotene isomerase
[TIGR02734] phytoene desaturase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAGT TTCAAACCCC CTCCCCGTTA ATAGAGCAAG AATGGGACGC GATCGTGATT 
GGCGCCGGAA TTGGGGGCTT AGTGGCTGCT ACCCAACTGG CGGTTAAGGG TGCGAAGGTG
TTGGTCCTGG AGCGCTATCT GATTCCCGGT GGCAGTGCCG GTTCCTTTGA ACGCCAGGGC
TACCGTTTTG ATGTTGGTGC TTCGATGATT TTCGGGTTTG GTCAACAGGG CACGACCAAT
TTACTCACCC GTGCTTTGGC AGCCGTCAAT CAGTCCCTGG AAACCCTGCC CGACCCGGTC
CAGCTTCACT ACCATCTCCC CGGCATCGAG ATTAAGGTGG ATCGTAGCTA TGAGAAATAT
TTGCAAGAGT TGAGCGATCG CTTTCCAACC CAGGCTGGAG GGATTCGGCG ATTTTACGAT
GCATGTACCC AGATTTTTGC CAGTCTGAAC CGGATGGAGT TGCTCTCCCT GGAAGATCCT
CGCTATCTGT GGCGGATGTT TCGTCAACAC CCCCTGGCTT GCCTCACCTT AGCCCGTTAT
CTGCCGCAAA CCGTCGGTGA TCTGGCCCGC CGTCATCTCA CCGATCCGCT GCTGTTAAAG
TTTATTGATA TGGAATGCTA CTGCTGGTCA GTGGTTCCTG CCGATCGTAC CCCTCTGATT
AACGCTGGTA TGGTCTTTGG CGATCGCCAC TACGGTGGGG TGAATTATCC CAGGGGAGGA
GTGGGACAAA TTGCCCAGAG ATTAGTCAGC GGGCTGGTGC AGGTGGGGGG AGAACTGCTT
TACCGGGCCA GGGTGAGCAA AATTTTGATC GAACGGGAAC GGGCGGTTGG GGTAAAACTG
GCCACCGGGC AAACCTTGCG CGCTAAAAAA ATTATCTCCA ATGCCACCCG CTGGGATACC
TTTGGTCATT TGCTTCCCGT TGTGCCGGCC GCTGAACAAC AATGGCGCGA TCGCTACCAG
CCCAGCCCCA GCTTCATCAG TTTGCACCTA GGGATAGAAG CAGCCCTCAT TCCTCCCGAT
ACCGCCTGTC ATCATATCCT GCTGGAGGAT TGGCAACAGA TGGAAGCTGC GGGAGGAACC
CTCTTTGTGT CGATTCCCAC GCTACTCGAT CCAAGCCTTG CCCCCGCTGG CCACCACATT
GTCCACGCCT TTACCCCTAG TTGGATGGAG GAATGGCAGC ACCTCACTCC CTCGGCCTAT
CAAGCCCGCA AACAAGCCGT AGCCGACTCC CTGATTCAAC GGCTAGAAGT TCTGCTACCA
GGGCTAAAAC AAGGAATTCG TCATCAGGAA ATTGGTACCC CTCGCACCCA CCGCCGCTTT
CTGGGCAGAA TGGATGGCAC CTACGGCCCG ATGCCCAGAC GTAAACTCCC CGGCTTACTC
AGAATGCCCT TCAACCGCAC AGTCGTTCCT GATCTGTATT GTGTGGGAGA CAGTACCTTT
CCGGGACAGG GGTTAAATGC TGTTGCTTTT TCCGGTTTCG CCTGCGCCCA TCGGGTTGGT
CTGGATTTGG GGTTAGCCCA TAACTGA
 
Protein sequence
MPKFQTPSPL IEQEWDAIVI GAGIGGLVAA TQLAVKGAKV LVLERYLIPG GSAGSFERQG 
YRFDVGASMI FGFGQQGTTN LLTRALAAVN QSLETLPDPV QLHYHLPGIE IKVDRSYEKY
LQELSDRFPT QAGGIRRFYD ACTQIFASLN RMELLSLEDP RYLWRMFRQH PLACLTLARY
LPQTVGDLAR RHLTDPLLLK FIDMECYCWS VVPADRTPLI NAGMVFGDRH YGGVNYPRGG
VGQIAQRLVS GLVQVGGELL YRARVSKILI ERERAVGVKL ATGQTLRAKK IISNATRWDT
FGHLLPVVPA AEQQWRDRYQ PSPSFISLHL GIEAALIPPD TACHHILLED WQQMEAAGGT
LFVSIPTLLD PSLAPAGHHI VHAFTPSWME EWQHLTPSAY QARKQAVADS LIQRLEVLLP
GLKQGIRHQE IGTPRTHRRF LGRMDGTYGP MPRRKLPGLL RMPFNRTVVP DLYCVGDSTF
PGQGLNAVAF SGFACAHRVG LDLGLAHN