Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_2330 |
Symbol | |
ID | 7288259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 2260493 |
End bp | 2262019 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643585324 |
Product | carotene isomerase |
Protein accession | YP_002483049 |
Protein GI | 220907738 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02730] carotene isomerase [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAAGT TTCAAACCCC CTCCCCGTTA ATAGAGCAAG AATGGGACGC GATCGTGATT GGCGCCGGAA TTGGGGGCTT AGTGGCTGCT ACCCAACTGG CGGTTAAGGG TGCGAAGGTG TTGGTCCTGG AGCGCTATCT GATTCCCGGT GGCAGTGCCG GTTCCTTTGA ACGCCAGGGC TACCGTTTTG ATGTTGGTGC TTCGATGATT TTCGGGTTTG GTCAACAGGG CACGACCAAT TTACTCACCC GTGCTTTGGC AGCCGTCAAT CAGTCCCTGG AAACCCTGCC CGACCCGGTC CAGCTTCACT ACCATCTCCC CGGCATCGAG ATTAAGGTGG ATCGTAGCTA TGAGAAATAT TTGCAAGAGT TGAGCGATCG CTTTCCAACC CAGGCTGGAG GGATTCGGCG ATTTTACGAT GCATGTACCC AGATTTTTGC CAGTCTGAAC CGGATGGAGT TGCTCTCCCT GGAAGATCCT CGCTATCTGT GGCGGATGTT TCGTCAACAC CCCCTGGCTT GCCTCACCTT AGCCCGTTAT CTGCCGCAAA CCGTCGGTGA TCTGGCCCGC CGTCATCTCA CCGATCCGCT GCTGTTAAAG TTTATTGATA TGGAATGCTA CTGCTGGTCA GTGGTTCCTG CCGATCGTAC CCCTCTGATT AACGCTGGTA TGGTCTTTGG CGATCGCCAC TACGGTGGGG TGAATTATCC CAGGGGAGGA GTGGGACAAA TTGCCCAGAG ATTAGTCAGC GGGCTGGTGC AGGTGGGGGG AGAACTGCTT TACCGGGCCA GGGTGAGCAA AATTTTGATC GAACGGGAAC GGGCGGTTGG GGTAAAACTG GCCACCGGGC AAACCTTGCG CGCTAAAAAA ATTATCTCCA ATGCCACCCG CTGGGATACC TTTGGTCATT TGCTTCCCGT TGTGCCGGCC GCTGAACAAC AATGGCGCGA TCGCTACCAG CCCAGCCCCA GCTTCATCAG TTTGCACCTA GGGATAGAAG CAGCCCTCAT TCCTCCCGAT ACCGCCTGTC ATCATATCCT GCTGGAGGAT TGGCAACAGA TGGAAGCTGC GGGAGGAACC CTCTTTGTGT CGATTCCCAC GCTACTCGAT CCAAGCCTTG CCCCCGCTGG CCACCACATT GTCCACGCCT TTACCCCTAG TTGGATGGAG GAATGGCAGC ACCTCACTCC CTCGGCCTAT CAAGCCCGCA AACAAGCCGT AGCCGACTCC CTGATTCAAC GGCTAGAAGT TCTGCTACCA GGGCTAAAAC AAGGAATTCG TCATCAGGAA ATTGGTACCC CTCGCACCCA CCGCCGCTTT CTGGGCAGAA TGGATGGCAC CTACGGCCCG ATGCCCAGAC GTAAACTCCC CGGCTTACTC AGAATGCCCT TCAACCGCAC AGTCGTTCCT GATCTGTATT GTGTGGGAGA CAGTACCTTT CCGGGACAGG GGTTAAATGC TGTTGCTTTT TCCGGTTTCG CCTGCGCCCA TCGGGTTGGT CTGGATTTGG GGTTAGCCCA TAACTGA
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Protein sequence | MPKFQTPSPL IEQEWDAIVI GAGIGGLVAA TQLAVKGAKV LVLERYLIPG GSAGSFERQG YRFDVGASMI FGFGQQGTTN LLTRALAAVN QSLETLPDPV QLHYHLPGIE IKVDRSYEKY LQELSDRFPT QAGGIRRFYD ACTQIFASLN RMELLSLEDP RYLWRMFRQH PLACLTLARY LPQTVGDLAR RHLTDPLLLK FIDMECYCWS VVPADRTPLI NAGMVFGDRH YGGVNYPRGG VGQIAQRLVS GLVQVGGELL YRARVSKILI ERERAVGVKL ATGQTLRAKK IISNATRWDT FGHLLPVVPA AEQQWRDRYQ PSPSFISLHL GIEAALIPPD TACHHILLED WQQMEAAGGT LFVSIPTLLD PSLAPAGHHI VHAFTPSWME EWQHLTPSAY QARKQAVADS LIQRLEVLLP GLKQGIRHQE IGTPRTHRRF LGRMDGTYGP MPRRKLPGLL RMPFNRTVVP DLYCVGDSTF PGQGLNAVAF SGFACAHRVG LDLGLAHN
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