Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_2052 |
Symbol | |
ID | 7287978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 1949602 |
End bp | 1950264 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643585048 |
Product | HEAT domain containing protein |
Protein accession | YP_002482776 |
Protein GI | 220907465 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG4741] Predicted secreted endonuclease distantly related to archaeal Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00216724 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACTATA ATCCAGCGGA TATGCGTTTT CTCGGCAGTC CGATCGATTA CATTATTTTT CAGGGTTATA CTGAAGCCAA AGATGGGCCG GCAGACATTC AGGCTGTGAT CATTGCAGAT ATCAAACGGG GCAAGTACGC TAACCTTTCA GGCATTCAGG AGAAGATTAA AGCTGCTGTT GAGGCTGGAA GAGTTTACTG GCAAACGATT TATATTGATG ATGAGAGTAA CTTAACCTTA ACTGACCTCC CCATCACTCA ATCTGAATTT ATTGAAAATC CTGGAGCCGC TGAGTTACCT CGTGAAAGTA ATCCTATTGA CCTACGCCAG CAAATCTTGG ACTGGGGAGA CTCCGGGCGG TTAGACTATG TTCCTCAACT GGTCATTCAG GCAGAATCCC AGAGTTATGA AATCCGCCGT TTAGTTGCTT CTGCAATCGG CAAAATCGCA GCGGTTAATC CAACGGTTAC TGTTTTAGAG CAAGCCATTC CCGCTTTGGC AAAATTGAGT CAGGATGACA AACCACAAAT TCGCCAGTAT GCTGTTAAAG CTTTAGGGAA CATCACCAGT CTGGCGGTGC GTCCCCTGCT GGAAGCTGCT CTGAATGATC CGGTAGACTA TGTGGCTCAG GCGGCCCAAA CTGCTTTACA AAAGTGGCAA TAA
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Protein sequence | MNYNPADMRF LGSPIDYIIF QGYTEAKDGP ADIQAVIIAD IKRGKYANLS GIQEKIKAAV EAGRVYWQTI YIDDESNLTL TDLPITQSEF IENPGAAELP RESNPIDLRQ QILDWGDSGR LDYVPQLVIQ AESQSYEIRR LVASAIGKIA AVNPTVTVLE QAIPALAKLS QDDKPQIRQY AVKALGNITS LAVRPLLEAA LNDPVDYVAQ AAQTALQKWQ
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