Gene Cyan7425_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_2002 
Symbol 
ID7287927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp1890078 
End bp1891760 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content45% 
IMG OID643584999 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002482728 
Protein GI220907417 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCCT ACGCCCAAAC GATTCTCCAA CTTCTCCAAC AGCTTGAACA ATTAGGATAT 
TCTCAGGCTG ACAAAATCTA TATTCACAAC GCCTATCAAT TCTTAACAAA AAGAGTGGTT
TGCCACTATC GTCCTTCTGG TAAAACCATG ATCGCCCATG CCATTGGCAC AGCTAGCATT
TTGGCATCAC TCAAAACGAC AAAAGAGGTG ATTGCAGCCG GAATGCTACA CGTTATTTAT
CCCTATGGAG ACTTTGGTGA TGGAACATCA GGAATCTCTT TAAAGAAACA ACAGCAAACC
ATTGCAGTCA TTGGAAAACA AGCAGAAGAG TACGTCAGAC AATATACTCA ATTTATCTGG
ACTTGGGAGA ATCTGCCCAA ACTTCAGCAA CGCATCCCAA TAATGACTCC TACGGAGCGA
AATGTACTCC TGATTCGTCT CGCCAATGAA CTGGAGGACA ATTTGGATTT AGGAATTCTC
TACTGTAGCA ATGCTGAGGT TCGCCAGAAG GGGAATAAGT TGGTTGGACA TTTGATGGTC
GAGTTAGCTA GCGCGTTAGG ATTTCCAACA TTGGCAGATC AACTCTCAAC AGCATTTCAA
GCAAGTCTTG AGACAAGAAT TTTTCGCGAG TTTTGTCACC CCGGTTTTGG ACCTGTAGAT
TTTGCTATCG CACCTCAATC TTATCTGCTT AAACCCACGA TCAAATTCCA TCGCACATTA
GTAGGAGTTC GGCAAGCAAC TATTCATTCA ATCAGCAAGA CCAAGCAAAA GCTCCGATCA
TGGGTTTTAC GGGCAAAGCA AAAAGTTAAG CGGACTGTGC GATCGCTCAT TCCTGATCAG
ACATTATCTG TTGAAAAGCA GCATTCCCCT CATCCCACTG CACAAACCAA ACTAGAGCCA
CGAAAAAACT CCACACAACC CATCCCATCG TTTGAGGGTC AGCATCTTCA GCAGCAAACT
TCCTCCAAAC GTAAAACGGT TCTCCTAACA GGTGCTGCTG GAGAAATTGG CAGATCGTTG
CGTCAACTTT TGGGAGAGCA GTATCACTTT CGTTGTCTTG ATCGCACTCG GATTCGAGAT
GCCCAAGATA TGGTCGTTGC TGATATCAGA AATTTCAGGT CCGTTCTGAA AGCCATGCAA
GGGGTTGAAG CCGTCATTCA CCTCGCTGCC AATCGGGAAG TCAATCAAGC CTGGAATGAT
GTTCACAAAA GTGGGATTCA AGGCACTTAC AACGTGTTTG AGGCCGCTCG GCAAGCAGGT
GTTAGACAAA TTATTTATGC CAGTACGATT CGTGTATCAG GTTGGCGAGA AATTATGCAG
GAACCTACAA TTACGCCTGA ACAAGGGGTT CGCCCAGATT CGCTTTATGC AGTTGGCAAA
GTCTTTGGCG AAGCGTTGGG GCAATTTTTT GCTGATCAAT ACGGGATATC TGTTGTTTGT
CTTCGGATTG GTGCATTTTG GCCTAAACCC ACCGTTTACG ACCTAAATGA CCACCTCCTT
GCAGCCTGGT GTAGCCCACG GGATCTGGCT CAACTAGTGG AGCGATCGCT CGAACGAGAA
AACCTTGGTT TCCAAATTTT CTATGGCATT TCGGGCAATA CTCGTCGGTA CTGGGATATC
AGCAATGCTC AGGAAATTTT AGGGTACAAA CCTCAGAACG ATGCAGAAGA CTTAATCATG
TAG
 
Protein sequence
MLSYAQTILQ LLQQLEQLGY SQADKIYIHN AYQFLTKRVV CHYRPSGKTM IAHAIGTASI 
LASLKTTKEV IAAGMLHVIY PYGDFGDGTS GISLKKQQQT IAVIGKQAEE YVRQYTQFIW
TWENLPKLQQ RIPIMTPTER NVLLIRLANE LEDNLDLGIL YCSNAEVRQK GNKLVGHLMV
ELASALGFPT LADQLSTAFQ ASLETRIFRE FCHPGFGPVD FAIAPQSYLL KPTIKFHRTL
VGVRQATIHS ISKTKQKLRS WVLRAKQKVK RTVRSLIPDQ TLSVEKQHSP HPTAQTKLEP
RKNSTQPIPS FEGQHLQQQT SSKRKTVLLT GAAGEIGRSL RQLLGEQYHF RCLDRTRIRD
AQDMVVADIR NFRSVLKAMQ GVEAVIHLAA NREVNQAWND VHKSGIQGTY NVFEAARQAG
VRQIIYASTI RVSGWREIMQ EPTITPEQGV RPDSLYAVGK VFGEALGQFF ADQYGISVVC
LRIGAFWPKP TVYDLNDHLL AAWCSPRDLA QLVERSLERE NLGFQIFYGI SGNTRRYWDI
SNAQEILGYK PQNDAEDLIM