Gene Cyan7425_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_1944 
Symbol 
ID7287869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp1825165 
End bp1825836 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content57% 
IMG OID643584941 
ProductSNARE associated Golgi protein 
Protein accessionYP_002482670 
Protein GI220907359 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0795121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.25437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACTG GGCACTTCTG GAAAATGAAC CTTCGTCACA GCTTATTCTG GCTGTTGATC 
CTTTGTCTGG GCGCAACGAT CGCCGCCTTC TGGTTTTTAG GTGGACTGGA TGCCGAGCAA
ATCCAAGGCT GGTTGAAGGA ATGGGGACTC TGGGCCCCGA TCGCCTACAT GGTGCTTTAT
GTGCTCGCCA CCTTGCTGAT TCTCCCTTCC ACTGCCCTGA ACCTGACCGG AGGTGCACTC
TTTGGCCCCT GGCTGGGAAC CCTGTGGACC ACAGTAGCTG CCCTGTTGGC TGCGATCGTC
GCCTTTGGGT TCAGCCGCAC CATTGGTCGC CAGGCCGTGG CCCAACGTCT GGCCGGTCGA
TGGCAGCCAA TGGATGCTGA AGTACAGCGG GGTGGGTGCT TTTATATGTT TGCACTCCGG
CTGGTCCCGA TCATGCCCTA CGGACTCGTT AACTTTGCCG CCGGTTTAAC CTCGATCAGT
TTTAAGGATT ATCTGCTCGG AACCGCCCTG GGGACCGTAC CGGGGATTCT GCCCTTTGTC
CTATTGGGGA GTTCCGGTTG GCGGGCCGTC CAGACCGGAG ATATCCTCCC CCTGTTGTTT
GCCCTCAGCC TGATTGCCTT GCTCGTAGCT GGCTCAACCT GGTATCGTCA GCGGTTAAAT
TTAAAGAAGT AG
 
Protein sequence
MRTGHFWKMN LRHSLFWLLI LCLGATIAAF WFLGGLDAEQ IQGWLKEWGL WAPIAYMVLY 
VLATLLILPS TALNLTGGAL FGPWLGTLWT TVAALLAAIV AFGFSRTIGR QAVAQRLAGR
WQPMDAEVQR GGCFYMFALR LVPIMPYGLV NFAAGLTSIS FKDYLLGTAL GTVPGILPFV
LLGSSGWRAV QTGDILPLLF ALSLIALLVA GSTWYRQRLN LKK