| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1827 |
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| Symbol | |
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| ID | 7287751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | + |
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| Start bp | 1696866 |
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| End bp | 1700375 |
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| Gene Length | 3510 bp |
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| Protein Length | 1169 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643584825 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_002482555 |
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| Protein GI | 220907244 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTAG CGGCGATCGT GCGGGCGTTG GTCAAGGCCC CCCTGACGAC AGAATTACTG
AACAAACTCC AGCAACAGCA CGTTCTAGAC CTGAAGGGGG CGGCCCGTCT ACCCAAAGGA
CTGGTGGCCT CTGCCCTGGC CCAGGGACAG CAGCACAATC TGTTAGTGAT CACCCCCACC
CTGGAAGAAG CGGGGCGCTG GGCAGCACAG ATGGAAGCTT TAGGCTGGTC AACAGTTCAC
TTTTACCCCA CCTCGGAAGC GTCCCCCTAC GAACCCTTTG ACCTGGAAGC TGAAATGACC
TGGGGGCAAC TACAGGTTTT AGCCGATCTG TTAAAGGCTC AGCAAAATGA TAAGCAAGCG
GGACAGCCGG GTCTGGCAAT CGTGGCTACG GAACGGGCTT TACAACCGCA TCTGCCCCCT
GTAGCAGCCT TTCAACCCGA CTGTCTGACG TTGACCCAGG GCATGGAAAT GGAGCTGAAG
CCCTTGAGCG ATAGACTGGC CCAGTTGGGG TATGAGCGGG TTGCGCTGGT CGAAACAGAA
GGGCAATGGA GCCGTCGTGG CGATATTATT GACGTTTTTC CGGTAGCCTG CGAATTGCCG
GTGCGGTTGG AATGGTTTGG GGATGAACTG GATAAAATCC GCGAGTTTGA CCCCGCCACG
CAGCGCTCTC TCGATAGCAT TGACCAGCTT ATTCTCACCC CCACCAGTTT CAGTCCCATT
ATTCTGTCTG CCCTCCAGGA GGCTCAGCGG CAACAGCTTA AAACGGTACT GGCCCCGGAG
GAACAGGAGA AATTAGCAAC TGGCCAGACG CCTGAAGGAA TGCGGCGCTT TTTAGGTCTA
GCCTTTGCCC ACCCCGCCTC TCTACTGGAT TATCTGCCGG ACAATACCCT GATTGCGATC
GATGAGGTGG ATCAATGCCG TGCCCATAGC GATCGCTGGG TGGAAGCCGC CGCTGAACAC
TGGCAACAAA TCCAATCTCC CCTGCTGATA CCCATTCATC GTCCCTTCAA TGAAACCCTG
GCCCCTGCCG AAGTTTTCCA ACGGCTATTG CTCTCGGAAC TGGTGGAAAC CGTTGCCTCA
TCAACCTCCT CCCCAGCCAC TCTCAATCTG GCCAGTCGTC CCGTCCCCGC CATTCCCCAC
CAATTTGGCA AGCTGGCAGA AACATTACGG ACTGAACGGG AACGCAATTT TGCCATCTGG
TTAGTTTCAG CCCAACCTTC CCGATCGGTG GCGCTCTTAC AGGAACACGA TTGCCCGGCC
CAATTTGTCC CCAACCCGAA TGACTTTCCA GCGATCGACA AGTTACAAAT CCAGCGCACC
CCCATCGCTT TGAAATATTC TGGGCTGGCG GAGCTGGAAG GGTTTATTTT GCCCACATTT
CGGTTGGTGG TGGTCACCGA TCGAGAATTT TTTGGACAGC ATCTACTGGC CACCCCCAGC
TATGTGCGTA AACGTCGCCG CGCCGCCTCC AAACAGGTTG ATCCGAACAA ACTGCAACCG
GGGGACTATG TGGTTCACCG CCAGCATGGG ATTGGCAAAT TTTTGAAACT GGAAAGCCTG
ACGATTAACC GGGAAACACG GGAATATCTG GTCTTACAAT ACGCCGATGG CTTGCTGCGG
GTGGCGGTGG ATCAACTCGG TTCCCTATCC CGTTTTCGGG CCACGGCTGA GCAGGCTCCT
GAACTGAATA AGATGACGGG CAAAGCCTGG GAACGCACCA AAAGCAAAGT TCGCAAAGCG
ATTCGCAAAA TTGCGGTGGA TTTGCTGCAA CTCTATGCCC AGCGATCGCA ACAACAGGGA
TTTGCCTTTC CCCTCGATCA GCCCTGGCAG GAAGAGTTAG AAGAGTCTTT TCCCTATCAA
CCCACCCCCG ACCAGGTGAA GGCAATTCAG GATGTTAAAC GGGATATGGA AAGCGATCGC
CCTATGGATC GGCTCGTCTG TGGTGATGTC GGCTTTGGCA AAACGGAAGT AGCGGTGCGG
GCTATTTTTA AGGCCATTAC AGCCGGAAAA CAGGTGGCTT TTCTGGCTCC CACCACGATT
CTTACCCAGC AGCACTATCA CACCCTCAAG GAACGGTTTG CTCCCTATCC AATTCAGATT
GGACTCCTGA ATCGATTTCG CAGTGCTGAT GAGCGTAAAA ATATTCTGCA ACGGCTGAAA
ACCGGCGAAT TAGATGTGGT CGTGGGCACC CATCAACTCT TGGGCAAAGG GGTGGTCTTC
CGCGATCTGG GTTTACTTGT GATCGATGAA GAACAGCGGT TTGGCGTGAA TCAAAAGGAA
AAAATCAAAA CCTTAAAAAC CCAGGTGGAT GTGCTCACCC TTTCTGCCAC ACCGATTCCC
CGGACGCTCT ATATGGCCCT GTCTGGGGTG CGAGAAATGA GTTTAATTAC CACCCCACCC
CCCTCCCGTC GCCCGATCAA AACCCATCTG GCCCCCTACG ACCCGGAAAC GATTCGCTCA
GCCCTGCGCC AGGAACTCGA TCGCGGCGGT CAGGTGTTCT ATGTGGTTCC CCGTGTGGAA
GGGATTGAAG AGGTTGCAGC AAAATTGCGC GAAATGGTTC CCAGTGCTCG AATTGCGATC
GCCCACGGCC AGATGGAAGA AGGCGAACTG GAAGCCACGA TGCTGACCTT TAACAATGGG
GAAGCCGAAA TTTTAGTTTG TACCACCATT ATTGAATCTG GCCTGGACAT TCCCCGCGTC
AATACGATTC TGATTGAAGA TGCCCAGAAA TTTGGCCTAT CGCAGTTGTA CCAGTTGCGG
GGACGGGTGG GCCGGGCCGG AATTCAAGCC CATGCCTGGC TCTTTTATCC CAAACTGAAT
ATGCTCACGG AAGCAGCCCG GCAACGATTA CGCGCTCTGC AGGAATTTAC CCAGCTGGGT
TCCGGTTATC AACTGGCGAT GCGGGATATG GAAATTCGTG GGGTGGGTAA TCTGCTGGGG
GCCGAACAGC ACGGTCAGAT GGATACGGTT GGTTTTGACC TCTATATGGA AATGTTAGAC
GAGGCGATCG CTGAAATTAG AGGTCAGGAA ATTCCCAAAG TTGATGACAC CCAAATTGAT
CTGAATCTCA CCGCCTTTAT CCCCGCTGAT TACATTCCCG ATTTAGATCA AAAGATGAGC
GCTTACCGGG CCGTGGCCTC CGCTGATTCA ACTGTAGAAT TAGCCCAAAT TAAAACCGAC
TGGAACGATC GCTATGGCCC GATTCCCAGT GCCGCCTTAC AACTGATTCG CGTCGTCGAG
CTGAAACAAA TTGCCAAAAA ACTGGGCTTT TCCCGGATTA AACCGGAAGG AACTCAGCAC
ATTATTCTGG AAACCCCGAT GGAAGAACCG GCCTGGAATT TGCTCAAAGC TAACTTGCCC
GAACATCTGC ATACCCGCTT TGTCTATAGC CCCGGTAAAG TCACCGTGCG TGGTTTGGGC
GTTGTTCCCG CCGACAGACA ACTGGAAAAC CTGATCGACT GGTTGAGCAA AATGCAAGGG
GCCTTGCCAG AGAATATATT AACAACTTGA
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| Protein sequence | MTLAAIVRAL VKAPLTTELL NKLQQQHVLD LKGAARLPKG LVASALAQGQ QHNLLVITPT
LEEAGRWAAQ MEALGWSTVH FYPTSEASPY EPFDLEAEMT WGQLQVLADL LKAQQNDKQA
GQPGLAIVAT ERALQPHLPP VAAFQPDCLT LTQGMEMELK PLSDRLAQLG YERVALVETE
GQWSRRGDII DVFPVACELP VRLEWFGDEL DKIREFDPAT QRSLDSIDQL ILTPTSFSPI
ILSALQEAQR QQLKTVLAPE EQEKLATGQT PEGMRRFLGL AFAHPASLLD YLPDNTLIAI
DEVDQCRAHS DRWVEAAAEH WQQIQSPLLI PIHRPFNETL APAEVFQRLL LSELVETVAS
STSSPATLNL ASRPVPAIPH QFGKLAETLR TERERNFAIW LVSAQPSRSV ALLQEHDCPA
QFVPNPNDFP AIDKLQIQRT PIALKYSGLA ELEGFILPTF RLVVVTDREF FGQHLLATPS
YVRKRRRAAS KQVDPNKLQP GDYVVHRQHG IGKFLKLESL TINRETREYL VLQYADGLLR
VAVDQLGSLS RFRATAEQAP ELNKMTGKAW ERTKSKVRKA IRKIAVDLLQ LYAQRSQQQG
FAFPLDQPWQ EELEESFPYQ PTPDQVKAIQ DVKRDMESDR PMDRLVCGDV GFGKTEVAVR
AIFKAITAGK QVAFLAPTTI LTQQHYHTLK ERFAPYPIQI GLLNRFRSAD ERKNILQRLK
TGELDVVVGT HQLLGKGVVF RDLGLLVIDE EQRFGVNQKE KIKTLKTQVD VLTLSATPIP
RTLYMALSGV REMSLITTPP PSRRPIKTHL APYDPETIRS ALRQELDRGG QVFYVVPRVE
GIEEVAAKLR EMVPSARIAI AHGQMEEGEL EATMLTFNNG EAEILVCTTI IESGLDIPRV
NTILIEDAQK FGLSQLYQLR GRVGRAGIQA HAWLFYPKLN MLTEAARQRL RALQEFTQLG
SGYQLAMRDM EIRGVGNLLG AEQHGQMDTV GFDLYMEMLD EAIAEIRGQE IPKVDDTQID
LNLTAFIPAD YIPDLDQKMS AYRAVASADS TVELAQIKTD WNDRYGPIPS AALQLIRVVE
LKQIAKKLGF SRIKPEGTQH IILETPMEEP AWNLLKANLP EHLHTRFVYS PGKVTVRGLG
VVPADRQLEN LIDWLSKMQG ALPENILTT
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