Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_1795 |
Symbol | |
ID | 7287719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 1646287 |
End bp | 1650279 |
Gene Length | 3993 bp |
Protein Length | 1330 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643584793 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_002482523 |
Protein GI | 220907212 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.173382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCTG AAGGCCCTTT TACTTCTCCC GTGCATCAGT CTTCTTTAGC TGAAGAAGCC TTTTTCTTCG ATCTGTCTCT CGATCTACTG GCGGTGGTGG GTCTGGATGG CTACTTTAAG CGGATTAATC CGATGTTCAG CCAAACCCTG GGCTATTCCG CTACCGAACT ATTAACCAGT CCTTTTCTAG ACTTTGTCCA TCCCGACGAT CGAGCCGCCA CTCTGGCAGA AATGGAGCAG TTAAAGGGCG GAACCCCCAC GTTGGCCTTC GAGAATCGTT ACCTCACCAG GGAGGGGGAT TATCGCTGGT TATCCTGGAC CGCATCGCCT CAGCTCGATC GGGCTGTGAT CTACTGTGTT GCCCGTGATG TCACCCAACA AAAGCAAACG GAAATAGCCC TGCGTGTCAG CGAAGAACGG TGGCAATTGG CGCTCAGGGG CAGTAATGAT GGCATCTGGG ATTGGAATGT ACAGACCAAC GAAGTGTTCT TTTCAGCCCG TTGGAAAACC ATGCTGGGTT ATGAGGAGGA TGAAATCAGC CATCACCTGG AGGAATGGGC CAAGCGAGTT CATCCCGACG ATCTAGCCTG GGTGATGCAA GCCATTCAAG ACCACTTTGC TCAAAAAACA CCCTTTTATG TGGCTGAGCA CCGGGTGCAA TGCAAAGACG GCGGCTATAA ATGGATTCTC GATCGCGGCC AGGCCATTTG GGATCAGGAC GGCAAGGTCT TGCGCATGGT CGGTTCCCAC ACAGATGTGA CCGAACGGAA AACCCTGGAA GCGGCACTGC GCACAGCCAA CGAAACCTTA GAGCAACGGG TGGCCCAACG CACCGCAGAA TTGGAGCAGA TCAATCGCAG TTTGCAGGCA AGCGAACTCA AGTTTCGTAC AGCGATCGAA CACATTCCCG ATGTCTTTGT GATTTACGAT GCCCACCGCC GGATTCAGTT TGTCAATCGG GCTGGTCTGG CCCTGAGTGG AGGATCGCTG CCGGACTTCC TAGGACGCAG GGATGAGGAA ATCTTTCCAG TCGAAGTCAC GCAGACCTAT CTGCCCCTGC TGCAGCAAGC CGTTGCCACA AAACGCTACC AAACGGGGGA ATGCACGATC GCCCTACCAA ATCGTGAACC CTACACCATT GTGGTCCAGT ACGTGCCCCT GCTCGATGGG AACGGGGAGA TCCAGCAAAT CTTTGGAATT AGCCACGACA TTACCCGCCG CAAACAAGCC GAAGATGCAA CTCGCCGTAG TGAACAACAG ATCAGGCGGA TTCTCGACAG CTTGTTCAGT TTTGTCGGTG TCATGACCCC TGATGGAATT CTGATTGAGG CCAATCGCAC AGCCTTAGAA GCAGCAGCCC TCCGCCCGGC AGACGTATTA GGTAAGCCCT TTGAAGACAC GTACTGGTGG TCGTATTCTC CAGAACTGCA AACCCAACTG CGCCAGGCGA TCACTCGGGC AGCCCAGGGA GAAATGGTTC GTTACGATGC GATCGTCCGG GTTAGAGAAG ATCAGTTGAT CACCATTGAC TTTACCCTGG GTCCCATCTT TGACGAAGCT GGACGGGTTA AATATTTGAT TCCCTCTGGC ATTGATATTA CCGAACGCAA ACAAGCTGAA ATCGCGTTAC AGCAAAGCCA GTCCCAGGTT CAACGGCAAC TGGCGGAAAT TGAAACCATC TACCAGTCTG CCCCGATCGG TTTGAACATC CTGGATACCG ATCTGCGCTT TGTCCGCATT AACCAGCGCC TAGCCGACAT GAATGGATTT TCAGTGGAAG AACACCTTGG CAAGACCATT CGAGACTTAC TGCCTGATCT GGCGGATACG GCGGAAGCCT TGCTGCGTCC GATCTTAGCC ACGGGAGAAC CGCTCCTGAA TGTCGAAATT CGGGGAGAAA CACCGGCCCA ACCGGGGGTG CAACAGATCT GGCTGGAAAG CTTTTTGCCG CTCAAGCAGG ACGATCGCAT CATTGGAATC AGTACAGTTT GTGAAGAAAT TACGGAGCGC AAGCAGGCAG AGGAAGCACT ACGGCGATCG GAGGAACGCT ATCGCACCCT GTTTGAGACG ATGGAAGATG GCTTTTGTGT GATTGAAATA CTGTTTGACG CCAACCAAAC GCCGATTGAT TATCGTTTTC TGGAGATTAA CCCCGCCTTT GAACAACAAA CCGGACTGCA CCAGGCTGTA GGTAAAACGG CCCGTCAGTT GATTCCCAAC CTGGAAGACT TCTGGTTTGA GACCTATGGC AGAGTAGCCC TGACTGGCGA ACCCCTGCGG TTTGAAAATG GTTCGGCGGT GATGAATCGC TGGTTTGAAG TCTATGCATT TCCGGTGGGG CAGCCCGAGC ACCACAAAGT TGCCCTCCTG TTCAAGGAGA TTAGCGAGAG AAAGCGTCTG GAAGCCGAAC GCCAGCAAGC CGAAATTGCC TTACGGGAAA ATGAAGATCG CTTGCGGATG GCGATCGCCT CTGCTCAGTT GGGCACCTGG GATTGGAATA TTGTGACTGG AAAATTGAAA TGGGATACGG GATGCAAAGC GATGTTTGGC TTAGGACCCG ATGCCGAGAT CAATATGGAG ACCTTTTTTG CCGGTGTCCA TCCCCAGGAC CGTGAGCAGT TAAAGGCAAT GGTGCAATCA CGGCTCAACC CAGCTTCCGG CGGCTCCTTT GATACAGAGT ATCGGACAAT TGGGCTGCAG GATAAAGTTG AACGCTGGCT ACGTTCCAAA GGACAGGCCT ACTATGATGC CAATGGCAAC CCCCTCCGCT TCAGTGGCAC AGTCCTGGAT ATTACCCAGC AAAAGCAAGC CGAAGCCCAC CGGGAACAGT TGCTACAACA AGAACAAGCG GCGCGGGAAG CTGCAGAGCG GGCAAATCGA ATTAAAGATG AATTTCTGGC CGTGCTCTCC CACGAACTAC GAACCCCACT GAACCCAATT CTGGGCTGGT CAAAACTGCT GCAATCCCCT CAGATCAGTG CTCAGAAACT ACAGCAGGGA TTAGCCACGA TCGAGCGCAA TGCCAAACAA CAGGTGCAAC TGATCGATGA TTTACTGGAT ACCTCTCGCA TCATTCGGGG CCAACTGAGC TTGAACCTGG CTGTTATTAA CTTATCTGAA CCCATCCTGG CCGCCTTAGA AACGGTGCGT TTATCTGCGG AAACCAAGGA AATTAAGCTG GAGGTGAAAC TGGGTTCCTG GCTTGGCCAG ATCCGGGGAG ATGTGGGCAG ATTGCAACAG GTAGTCTGGA ACCTGTTATC GAACGCCATT AAATTTACGC CCCCAGGAGG CAGAATAACC GTCCGGCTCA GCCAGGTCGA TCGTTGGGCC CAAATTCAAG TGCGCGATAC CGGCAAGGGA ATTCAACCGC AATTTTTACC CCATGTGTTT GAGTTGTTCC GACAAGAAGA TAGCTCAACA ACGCGATCCT TTGGTGGCTT GGGCTTAGGA CTGGCGATCG CTCGTCAGGT GGTTGAAGCC CATGGGGGGA CGATCATGGC TGCCAGTCAG GGCGAAGGAC AGGGGGCAAC CTTTACCGTA CTGCTGCCAT TAATCCCTGC GGCGATCACG AATGTTCCTG CTGACCCTCA ACCTCAACCC CTGAATATCG AACAGCTGCG GGTGATGGTG GTGGATGATG AGGCGGATTC TCTGGAAGTC GTTAAGGTTG TTTTGGAACA GCAAGGGGCG ATTGTCCAAG CCCTGCCCTC AGCTCCCAAA GCTCTCCAGC TCCTGACCGA GGTTCCCTTT GACTTGCTCG TCAGCGATAT TGGCATGCCC GAAATGGATG GTTACACCTT CATTCGTCAG GTGCGGACTT TACCGTCGTC CCTCAATCGC AATATTCCAG CGATCGCCCT GACCGCCTAC GCCAGCGACA TGGATCAACA CCAGGCCCTA TCCACAGGCT ATCAATTCCA TCTGGCCAAG CCCCTCGAAC CCGAAGCCCT GGTTAGAGCC ATCACCAGGT TGGGACTGCC AAGGCCGGAT TAA
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Protein sequence | MTAEGPFTSP VHQSSLAEEA FFFDLSLDLL AVVGLDGYFK RINPMFSQTL GYSATELLTS PFLDFVHPDD RAATLAEMEQ LKGGTPTLAF ENRYLTREGD YRWLSWTASP QLDRAVIYCV ARDVTQQKQT EIALRVSEER WQLALRGSND GIWDWNVQTN EVFFSARWKT MLGYEEDEIS HHLEEWAKRV HPDDLAWVMQ AIQDHFAQKT PFYVAEHRVQ CKDGGYKWIL DRGQAIWDQD GKVLRMVGSH TDVTERKTLE AALRTANETL EQRVAQRTAE LEQINRSLQA SELKFRTAIE HIPDVFVIYD AHRRIQFVNR AGLALSGGSL PDFLGRRDEE IFPVEVTQTY LPLLQQAVAT KRYQTGECTI ALPNREPYTI VVQYVPLLDG NGEIQQIFGI SHDITRRKQA EDATRRSEQQ IRRILDSLFS FVGVMTPDGI LIEANRTALE AAALRPADVL GKPFEDTYWW SYSPELQTQL RQAITRAAQG EMVRYDAIVR VREDQLITID FTLGPIFDEA GRVKYLIPSG IDITERKQAE IALQQSQSQV QRQLAEIETI YQSAPIGLNI LDTDLRFVRI NQRLADMNGF SVEEHLGKTI RDLLPDLADT AEALLRPILA TGEPLLNVEI RGETPAQPGV QQIWLESFLP LKQDDRIIGI STVCEEITER KQAEEALRRS EERYRTLFET MEDGFCVIEI LFDANQTPID YRFLEINPAF EQQTGLHQAV GKTARQLIPN LEDFWFETYG RVALTGEPLR FENGSAVMNR WFEVYAFPVG QPEHHKVALL FKEISERKRL EAERQQAEIA LRENEDRLRM AIASAQLGTW DWNIVTGKLK WDTGCKAMFG LGPDAEINME TFFAGVHPQD REQLKAMVQS RLNPASGGSF DTEYRTIGLQ DKVERWLRSK GQAYYDANGN PLRFSGTVLD ITQQKQAEAH REQLLQQEQA AREAAERANR IKDEFLAVLS HELRTPLNPI LGWSKLLQSP QISAQKLQQG LATIERNAKQ QVQLIDDLLD TSRIIRGQLS LNLAVINLSE PILAALETVR LSAETKEIKL EVKLGSWLGQ IRGDVGRLQQ VVWNLLSNAI KFTPPGGRIT VRLSQVDRWA QIQVRDTGKG IQPQFLPHVF ELFRQEDSST TRSFGGLGLG LAIARQVVEA HGGTIMAASQ GEGQGATFTV LLPLIPAAIT NVPADPQPQP LNIEQLRVMV VDDEADSLEV VKVVLEQQGA IVQALPSAPK ALQLLTEVPF DLLVSDIGMP EMDGYTFIRQ VRTLPSSLNR NIPAIALTAY ASDMDQHQAL STGYQFHLAK PLEPEALVRA ITRLGLPRPD
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