Gene Cyan7425_1738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_1738 
Symbol 
ID7287662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp1582037 
End bp1582744 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content50% 
IMG OID643584738 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_002482468 
Protein GI220907157 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.324615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.173582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCA AAGCCGTTCT ATTCGATTTT AATGGTGTCA TTCTGGATGA TGAACCCCTG 
CACAAACAGC TGATCGAAGA GATTTTGATC AATGAAAACT TGCGCCCACG GGCAGGCGAA
TTTGAACAGT TTTGTCTGGG GCGCAGCGAT CGGGCTGGAC TGAAGGATCT CCTTACCCAG
CGGGGGCGAT GGCTGACCGA AACTCACTTA GATCGGTTAA TTGCCACAAA AACGGCTGCC
TATCAACAAT ACCTAAAGCA GCTGGAAACG TTACCCCTAT TTGAGGGACT GCAACCCCTG
CTGGAACAAT TGCAAAAAGC TGAGATCAAA ATGGCCGTGG TCACAGGAGC GCAGCGATCG
GAAGTTATGA AAATACTGGA GCGCACGCAG TTATCCGCCT ATTTTTCAGT GCTGGTTACC
GCTGAGGATT GTCAGGCCAG TAAACCGGAA CCAGAAGGTT ATCTGCTGGC AGTTCAACTG
CTGGCCGAAA AATTTCCCCA GTTACAGCTC ACGCCACTCA ACTGTCTGGC GATCGAGGAT
TCCTTTGCCG GAATTGAAGC AGCGAAACGG GCTGGCATTC CTGTGCTTGG GGTTGCCCAT
ACCTACCCTT TTCACATGCT GCAACGACGA GCCAACTGGA CAGTGGACTA TCTGCAGGAT
CTGGAATTGG ATCGCCTGAT TCAAACCTAT GGTGGTTCTC CAGCTTAA
 
Protein sequence
MSLKAVLFDF NGVILDDEPL HKQLIEEILI NENLRPRAGE FEQFCLGRSD RAGLKDLLTQ 
RGRWLTETHL DRLIATKTAA YQQYLKQLET LPLFEGLQPL LEQLQKAEIK MAVVTGAQRS
EVMKILERTQ LSAYFSVLVT AEDCQASKPE PEGYLLAVQL LAEKFPQLQL TPLNCLAIED
SFAGIEAAKR AGIPVLGVAH TYPFHMLQRR ANWTVDYLQD LELDRLIQTY GGSPA