| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1709 |
|---|
| Symbol | |
|---|
| ID | 7287633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 1549390 |
|---|
| End bp | 1550874 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643584709 |
|---|
| Product | type III restriction protein res subunit |
|---|
| Protein accession | YP_002482439 |
|---|
| Protein GI | 220907128 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.17082 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0133576 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGTA TTCCTACCCT GTCCTACGAT CGCGGCACTT TAATCCTGCA CCCACCCCCC
AGAGGTAAGG ATTGGCTGGA CTATGCCCTC TGGGACGATC GGGTCGAACG ATTTCGTATC
CCTGCCCATC AATACCGTCA GCTTTTAGAC ATTTTCAGCA AGAACGGCAT CGAGGTAGAG
GATCGGGCGA TCGACTACGG CAGAGTGCAA CTCGTTCCCC GTCTGCAGAT GACCCCCTAT
CCCCACCAGG CGGAAGCCTT AGAGGCATGG CAACGATCGG GCCATCGGGG CGTGGTGGTG
TTACCCACAG CGGCAGGCAA AACCTATCTG GCTCAGTTGG GGATGCAACT CCTCCAGCTC
AACACACTGA TTCTGGTTCC CACCCTGGAT TTGATGCACC AGTGGTATGC CCATTTGCAG
GCTGCTTTCC CGGATACTGA GATTGGCTTA CTGGGCGCTG GCAATCGCGA TCGCAGTCCC
ATTCTGGTGG CCACCTACGA CAGTGGAGCC ATTCATGCTG AAAGCCTGGG TAATCACTAC
GGTCTGCTGA TCTTTGATGA GTGCCATCAC CTACCCACGG ATTTCTATCG GATTATTGCC
GAATTTGCGA TCGCCCCCTA CCGCTTAGGC TTAACTGCCA CCCCTGAACG CAGCGATGGT
AAGCACACTG AACTGGCCAC CCTGATTGGC CCGGATGTTT ACCGCACCTC CGCCGCTGCT
CTAGCCGGAA CTGTGTTGGC GGACTACGAA ACGGTGCAGA TTCGGGTGCA ACTTTCCCAG
CAGGAGCGCG ATCGCTACGA TACCTGCATC GCCACCCGCA ACAATTTCCT TAGAAACAAC
AACATTGGTT TGGGCACGCT ACAGGGTTGG CAACATTTTG TCCAGATCAG CGCCCGATCA
GCAGCGGGAC GGCAGGCCAT GATTGCCCAT CGTCAGGCCC GAGCGATCGC CTTTGGGACA
GAAGCAAAAT TGCGCGTGCT GGTGGATTTA TTGGCAGAAC ACTACCCGGA ACAAACACTC
ATTTTTACGG ATGACAACGC CACGGTTTAT CGCATTTCTC AGGAGTTGCT CATTCCCGCC
ATTACCCACC AAACCCCCGT CAAAGAACGC CACGCCATCC TGAGTCGTTT TCGGACGGGA
GAGTATAAAA CGATCGTCGC TTCACGGGTG TTGAATGAGG GAGTCGATGT CCCAGAAGCA
CGGGTGGCGA TCGTTCTCTC TGGCACAGGT TCCCCCAGGG AATTAATTCA GCGATTGGGG
CGGGTACTCC GCAAAGGGAA AGATAGCCAG AAACGGGCCA TGCTCTACGA AATTGTGGCG
GAAAACACCA GTGAAGAAAA TACGGTCAAA CGGCGGCAAC CTCAAGCCCC AAAAGCTCAC
CCTACCCGTC AGTTAGAACT GATGCCTTCT CCCTACAAAC CAGTAGAGGA ACATTTACCC
AAAGCCGCAG AAAATACCAG CGATCGGGAG TATGGCAATG GGTGA
|
|---|
| Protein sequence | MARIPTLSYD RGTLILHPPP RGKDWLDYAL WDDRVERFRI PAHQYRQLLD IFSKNGIEVE
DRAIDYGRVQ LVPRLQMTPY PHQAEALEAW QRSGHRGVVV LPTAAGKTYL AQLGMQLLQL
NTLILVPTLD LMHQWYAHLQ AAFPDTEIGL LGAGNRDRSP ILVATYDSGA IHAESLGNHY
GLLIFDECHH LPTDFYRIIA EFAIAPYRLG LTATPERSDG KHTELATLIG PDVYRTSAAA
LAGTVLADYE TVQIRVQLSQ QERDRYDTCI ATRNNFLRNN NIGLGTLQGW QHFVQISARS
AAGRQAMIAH RQARAIAFGT EAKLRVLVDL LAEHYPEQTL IFTDDNATVY RISQELLIPA
ITHQTPVKER HAILSRFRTG EYKTIVASRV LNEGVDVPEA RVAIVLSGTG SPRELIQRLG
RVLRKGKDSQ KRAMLYEIVA ENTSEENTVK RRQPQAPKAH PTRQLELMPS PYKPVEEHLP
KAAENTSDRE YGNG
|
|---|
| |