Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_1653 |
Symbol | |
ID | 7287576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 1496266 |
End bp | 1498083 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643584652 |
Product | zinc finger SWIM domain protein |
Protein accession | YP_002482383 |
Protein GI | 220907072 |
COG category | [S] Function unknown |
COG ID | [COG4715] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.170243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAAAAA TTTCTTTCTC TGAAGCGACC CTCCGCTCCC ATGCCACCCC ATCTTCTTTT GAGCGAGGCG AAGACTACTA CCAAGGTGGT GCCGTGATCG AAGTGATCAA GCGAGACCAT CTGATTCAAG CCAGAGTGGA GGGCAACGAG CTAGAACCCT ATACCGTAAC CCTGGAATGC GATCGAGGTG GAATCCGGCA AGCTTACTGC AGCTGTCCCT ACGGTTTTGA GGGTTGGTGT AAACATATTG TGGCGACAGG ATTGGTGTGT TTGCGCCGTC CCCAGCAGGT CGAGGAACGT CCACCTTTAG CGGAATTACT ATCAGATCTG AATCTACACC AGGCCCGTCA GTTGATTGAG CAACTGGTGC AGCGGCATCC AGAATTACAC CACGAAGTCG ATCGACTGAT CCTGAAACTA AACGCCGTTC AACCAAGTCC GCCGAGTAAA CCGCAGCGTC AAACCTCTGT TAATCCGGCT CCCTTTTGCA TGCAAACTCG ACAGCTATTG CGGGAAACGC GAGAACACTG GGAATGGGGC GGTGAAGATA ATCCTTTAAG AGATCAACTA CCGGACCTGG TCGCGGAGGC AGAGGCGTTC AGTAGGGCGG GAGATGGAGC CAATGCGATC GTGATTCTGG CAGCGATTAC GGAAACCTGT GCCACTGAAT GGGATGAGCT GGCAGATCTG GGCGGTAATG GCGAAGATGT GGTGAGTTTA CTCGATCCGG CCTGGGCAGC GGCAATCTTG AACACAGAGC TGAGTTCCCA GGAGACGATC GATACCCAGG TGCAACTAGA AGAATGGGGG GCAGTTTTTA GCCAGGATTT TGCCATCAGC ACAGAAGCTC TGCGGCAGGG ATGGGATGAT CCGGCCCTGG AAGCACTATT ACAGGGAAGA GAGGCTGACC TCTGGCCCGA TGGGCGACCG GACTGTGCCG ATGACCTAAC CTTAATTCGA CTGAACATTC TGGAACGGCA GGAACGCTTA GACGAATACT TAAACCTGGC TCACGCTGAA GGACTCTGGC AAGCCTATTT GACCCTATTG ATTAGGTTGA ATCGGATTGC AGAAGCTTTG ACTTACAGCG ATCGGTTGAC CTATCTGGAG GATGCCTTTG CGGTTGCTAA AGCTCTACGG GAACGGGGGG AAGAGCAGGC CGCACTGGAG TTAGCAGTAC AGGGATTAAG CTTAGCCAAG CGCCCCATCA AGGGGTTGAC CTGGTATGAA CTGAATCACA TCGATCGAGG TCAGAACTAC TATAAGTACG ACCTGGCTAC CTGGACCAGT GAACTGGCAG AGGGTCTGGG CGATCGTGAC ACTGCTTTAG CGACTCAGAT CACCGCTTTT CAGGCCCGTC CCAGTCAGGC CGATTATGCT CGAACCCATA GCCTGGCAGA GGGGCAATGG CCAACGGTGC GATCGCAATT ACTCGATTAT TTACGCCAGC TCGATACCTG GACCAGTCTT GAGGCAAAGG TCAATATTTT TCTGGAAGAA GGTTTGATAG CGGATGCGAT CGCCACCATC GATCAGCGGT TTGGATACGA CCCTCTCTTG TTGCGAGTGA TGCAGGCGGC AATCAGCGTG AACCCCCAGT GGGTGATTGA TCGGGCCAGA CAGCGGGCGG AGGACATCAT CGATCGGGGT AAAGCCGAAG CCTATGATAC TGCGGTGCAG TGGTTAGAAC AGGTAAAAGC AGCTTACACC CAGTTGGAAG AGCTCAGCGA ATGGCAAACC TACCGCGATC AGCTCAAAAC GAAGCATGGG CGCAAATATA AACTGATGAA CCTGATGAAA ACTGCCAACC TGCTCTAG
|
Protein sequence | MTKISFSEAT LRSHATPSSF ERGEDYYQGG AVIEVIKRDH LIQARVEGNE LEPYTVTLEC DRGGIRQAYC SCPYGFEGWC KHIVATGLVC LRRPQQVEER PPLAELLSDL NLHQARQLIE QLVQRHPELH HEVDRLILKL NAVQPSPPSK PQRQTSVNPA PFCMQTRQLL RETREHWEWG GEDNPLRDQL PDLVAEAEAF SRAGDGANAI VILAAITETC ATEWDELADL GGNGEDVVSL LDPAWAAAIL NTELSSQETI DTQVQLEEWG AVFSQDFAIS TEALRQGWDD PALEALLQGR EADLWPDGRP DCADDLTLIR LNILERQERL DEYLNLAHAE GLWQAYLTLL IRLNRIAEAL TYSDRLTYLE DAFAVAKALR ERGEEQAALE LAVQGLSLAK RPIKGLTWYE LNHIDRGQNY YKYDLATWTS ELAEGLGDRD TALATQITAF QARPSQADYA RTHSLAEGQW PTVRSQLLDY LRQLDTWTSL EAKVNIFLEE GLIADAIATI DQRFGYDPLL LRVMQAAISV NPQWVIDRAR QRAEDIIDRG KAEAYDTAVQ WLEQVKAAYT QLEELSEWQT YRDQLKTKHG RKYKLMNLMK TANLL
|
| |