| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1584 |
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| Symbol | |
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| ID | 7287507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | - |
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| Start bp | 1434559 |
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| End bp | 1435542 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643584584 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_002482315 |
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| Protein GI | 220907004 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0418085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACTC TAAAAACCAA AACTCAGACC CGTGACTCGA TGGTCAGTAC CGACATGGTT
CGCACCTATC TGCACGAGAT TGGGCGTGTG CCGCTGTTAA CCCACGAGCA GGAAATTGTT
CTGGGTAAGC AGGTACAGCA ATTAATGGAA CTGCTGGAAG CACGGGAGAA ACTGACCACC
AGTCTTGATC GTTCCCCCAC GGCGGAGGAA TGGGCTGAAC AGGCCAATTT GAGTGTGGCC
GACCTGAACA CTGCAGTGCG ACGGGGACAG CGCGCTAAAC AGAAGATGAT TGAAGCCAAC
CTGCGCCTGG TGGTTTCCGT AGCCAAAAAA TACCAGAAGC GCAATCTGGA ACTGCTGGAT
CTGATTCAGG AAGGAACCCT TGGGCTGGAG CGAGGGGTAG AAAAGTTTGA TCCCACGAGG
GGTTATAAAT TCTCCACCTA TGCTTACTGG TGGATCCGCC AGGCCATTAC CCGGGCGATC
GCTCAGCAGG CTCGGACAGT GCGGCTTCCC ATTCACATCA CTGAAAAGCT GAACAAGATC
AAAAAAGCTC AGCGGGTGCT CTCCCAGCGG TTGGGACGGA GCGCCACCCC AGCGGAAATT
GCCCAGGAGT TGGAACTGGA ACCCTCGCAA ATCAGAGAAT ACCTCACCCT GGCCCGTCAA
CCTGTATCCC TGGATCTGCG GGTGGGGGAT AACCAGGATA CGGAATTGCG CGATCTACTG
GAAGATGACA GTCCTTCTCC CGAACAGTAC ACCACCGGTG AAGCCTTGCG GGATGATGTC
AACCATCTCC TGGCCGAGCT GACGCCACAG CAACGGGAAG TCTTAACCCT GCGCTTTGGG
CTGGAGGATG GCAAAGAGCT ATCCCTGGCT AAAGTGGGTG AGCAACTCAG TCTCAGCCGG
GAGCGGGTGC GTCAATTGGA ACGGCAGGCG CTGGATCATC TCCGTCGGCG CAAATTGCAA
GTGCGGGAGT ACCTGGCCAG TTAA
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| Protein sequence | MSTLKTKTQT RDSMVSTDMV RTYLHEIGRV PLLTHEQEIV LGKQVQQLME LLEAREKLTT
SLDRSPTAEE WAEQANLSVA DLNTAVRRGQ RAKQKMIEAN LRLVVSVAKK YQKRNLELLD
LIQEGTLGLE RGVEKFDPTR GYKFSTYAYW WIRQAITRAI AQQARTVRLP IHITEKLNKI
KKAQRVLSQR LGRSATPAEI AQELELEPSQ IREYLTLARQ PVSLDLRVGD NQDTELRDLL
EDDSPSPEQY TTGEALRDDV NHLLAELTPQ QREVLTLRFG LEDGKELSLA KVGEQLSLSR
ERVRQLERQA LDHLRRRKLQ VREYLAS
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