| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1573 |
|---|
| Symbol | |
|---|
| ID | 7287496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 1418682 |
|---|
| End bp | 1419674 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643584573 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_002482304 |
|---|
| Protein GI | 220906993 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000229166 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000000804561 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACC CTGAGCTAAT CATTCTAGAT GTTGGGCATG GCAACTGTGC GTTGCTGAGA
GATACAGAGG GCGTGATACT AATTGATTGT CCTCCTGGTT CTGTGTTGCC AGAAACATTA
AGCCACCTTG GTATTGAAGA AATTTCTCAT GTTTTGATTT CTCACGCTGA TCAAGATCAT
ATTGCTGGAA TTCCTCAACT GCTCTTGAAT GAAAGTATTC GAGTTAATAA CATTCATCTC
AACTCCGATT GGATAAAGAA CACTGAAATT TGGAAAGATG TAATGATCGC GTTAGAAGCA
AGTGAACGCT CAGGTGTGAG GATAGAAGCA CAATTGACAA CCTCAACTAC AGGTCGCCTC
GATGTTGGGC AAGTCAATAT CCAAGTACTT GCTCCAAGCC CTGTGCTTGC ATTATCAGGT
GTAGGTGGAA GAGACTTGGC AGGTAGAAGA CTGCGTGCTA ATTCTATGTC AGCCGTTATT
TCTCTAGTTT ATAACACTCG AAGAGTTGCC ATTTTAGCAG GAGATTTAGA CCAAGTTGGA
TTAGATAATT TACTTAAAGA AGATTTAGAG CTACAGGCTG ATGTTCTAGT TTTTCCACAT
CATGGTGGTA GGCCAGGTTC TAACGCTGAT AGCAAAGCTT TCGCTCAAAA ATTATGCAAC
TTAGTTCAGC CTAAATTAGT AGTTTTTTCA ATTGATAGAA GTCTCCATAA CAACCCAAAC
GATGAAATTA TGGAGGGCGT TTTATCATCT GTACCAGAAG CTCACATTGT GTGTACTCAA
CTGTCAGAAA AATGTTCTGT AACCTTACCT AGTGAAATTT CTAGCCATCT CAATAGATTA
CCTTCTAAAG GGCTTATAAG CAAAAAGTGC TGTGGAGGAA CAATCTTAAT TGAGATTGGA
GAAAATGCTA GTACTTACAC TCCTGCACTC GATACCCATA GAAGATTTAT CGCTCAATAC
CCAAATTCTA TCTGCCGCAA ATTGCTGTCC TGA
|
|---|
| Protein sequence | MEYPELIILD VGHGNCALLR DTEGVILIDC PPGSVLPETL SHLGIEEISH VLISHADQDH
IAGIPQLLLN ESIRVNNIHL NSDWIKNTEI WKDVMIALEA SERSGVRIEA QLTTSTTGRL
DVGQVNIQVL APSPVLALSG VGGRDLAGRR LRANSMSAVI SLVYNTRRVA ILAGDLDQVG
LDNLLKEDLE LQADVLVFPH HGGRPGSNAD SKAFAQKLCN LVQPKLVVFS IDRSLHNNPN
DEIMEGVLSS VPEAHIVCTQ LSEKCSVTLP SEISSHLNRL PSKGLISKKC CGGTILIEIG
ENASTYTPAL DTHRRFIAQY PNSICRKLLS
|
|---|
| |