Gene Cyan7425_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_1566 
Symbol 
ID7287489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp1411609 
End bp1412295 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content52% 
IMG OID643584566 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002482297 
Protein GI220906986 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00435599 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATCGAA TTCTGATCGT TGAAGATGAA CCCCGAATTG CCGCCTTTGT TGAAAAGGGC 
TTGCGATCGC ACGGCTTTGT CACCTCCGTT GCCACTGATG CCAATGAGGC CCTAGACCTT
GCCCTGGGGG GAGCCTTTGA CCTGCTGATT CTGGATCTTG GTCTGCCGGG TCAAGATGGC
TTACAGGTGC TTGGACAACT GCGGGGACAG GGCGAATCGC TGCCAATTAT TATCCTCACC
GCTCGGGATG ATATTCGCGA TAAGATTGCC AGCTTTGAAG GGGGAGCTGA TGATTATCTC
ACCAAGCCTT TTCGGTTTGA GGAACTGCTG CTGCGGGTCA AGGCTAGATT GCGAACCAAC
TATGGTGTGC CAAAAAGACA GGAAGAATCA GTGCTGAAGT GCGATAACGT TCTGCTGGAT
CTACGGACCC GTAAGGTCAA AGTGGGCGAT CGCTGGTTGG AATTGTCAGC CCGTGAGTTC
ACTCTGGCAG AAACTTTCTT TCGCCACCCT GGACAGGTGT TAAGCCGAGA GCAATTGCTC
GATCGGGTTT GGGGGTATGA CTATGATCCC GGCTCCAATA TTGTGGATGT CTATGTGGGC
TATCTGCGCA AAAAATTGGG CAATGAGCTG ATTGAAACCG TGCGGGGGAT GGGATACCGC
TTAAAGCTGC CTGTAACGAA GGGCTGA
 
Protein sequence
MHRILIVEDE PRIAAFVEKG LRSHGFVTSV ATDANEALDL ALGGAFDLLI LDLGLPGQDG 
LQVLGQLRGQ GESLPIIILT ARDDIRDKIA SFEGGADDYL TKPFRFEELL LRVKARLRTN
YGVPKRQEES VLKCDNVLLD LRTRKVKVGD RWLELSAREF TLAETFFRHP GQVLSREQLL
DRVWGYDYDP GSNIVDVYVG YLRKKLGNEL IETVRGMGYR LKLPVTKG