Gene Cyan7425_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_1548 
Symbol 
ID7287471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp1389390 
End bp1392404 
Gene Length3015 bp 
Protein Length1004 aa 
Translation table11 
GC content52% 
IMG OID643584548 
ProductFHA modulated ABC efflux pump with fused ATPase and integral membrane subunits 
Protein accessionYP_002482279 
Protein GI220906968 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.506154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATG CTCCCCTTGT TCTAGCCCAT CTGGTCATCA GTAAGGATCA CAGTCCTCCG 
ATCGATTTTC CCATCTCTAC CGATACCGTT ACAATTGGGC GTGCTAAGGA TAATCTCCTT
TGTTTAGATG ACCCGCTCAT TTCCAGGTAT CATGCCCGTC TTAGCCAGGA CAGCAGGGGA
TGGAGTCTCA CGGACCTGGG GAGTGCAGAA AAAACTTTGG TAAATGGAAT TGAGGTACTG
CCTCGCACAC CCGTACCCCT GGACGAGGGG GATTTGATTG AGATTGGCAG CTTTGAATTG
CGCTTTAGTC AGGAGCACCA TGAGGGTGTT AGTGCAACAG GGACAGCGGT GACGATCATG
GCCCAACAGG CCGCTGAAGG GACAGTGGTT GCAGCCATTC CGCTCGTTCC TATCCTGCGG
GTGGTGACAC CCAATTGGAC AAAAGACTTT CCGCTGGAAA AAGACATCGT TCGGCTGGGG
CGCGATCCCC AAAGCGATAT TGTCATTGAT GCGCCTGTTG TGTCATCTAA TCATGCTCAA
ATTAAACGCA CACCAGCAGG CTATGAAATT TTGGATTTGG ATAGTTTGAA CGGACTGGCC
TTTAACGGGC GGTTAGTTAA AGAGCGCTTG TTGCAACTGG GGGATGTCAT TTACATCGGC
ACCAGTGTCA CCCTGCTTTA CCAGACGAAG CAGTTCCAGG AGGACAGTGA GCCTGTTAAA
CTCTTGAATC TGCGCGATCG CGATCGCTGG ACGCTGGGGC GAGACTCGCA AAACGATATG
GTGATCGATC ACCCTATGGT GTCCCGGTGC CATGCCCGAA TTGAGCGCAA AAAGAATGCC
CTGGTGCTGA CTGATCTGGG CTCCACCAAT GGCACCTTTG TCAATGGTCA GCCGATTACT
GCGGAGTACT TCCTCCAGCC GGGGGATACG ATCAACATTG GTCCCTCCCG ATTTGTCTTT
AACCTGGATG AGACGATCGT CCATCACGTT GAAGGCAACA ACCTGCGCCT GGATGCGATT
CACCTGAAAA AAGTGGTAGG TGAGGGCACG ATCCTGCTAA ATGATATTTC TCTCTCAATT
CTGCCCAGGG AATTTGTGGT GATTGTGGGG GGAAGTGGTA GTGGTAAATC AACCCTGCTT
GATGCCCTCA ATGGCTTTCG TCCGGCCACC AGTGGTACGG TGCTGCTGAA TCAAGTTGAC
CTCTACAAAA ACTTCAACGC CTACCGCACC GCTCTGGGTT ATGTTCCCCA GGATGACATC
ATCCATATGG AGCTGACCGT GACCGAAGCC CTGGACTATG CGGCTCAGCT CCGGATGCCC
CCCGATACCA CAGCTCAGGA ACGGCGCAAG CGGATTGAAG AAGTGATTGA GGATCTGGAT
CTGGGGGCGC GGCGGGATGT GCAGGTACGG AGGCTGAGTG GGGGGCAACG CAAACGGGTG
TCGATCGGGG TGGAGCTGAT CACGAAACCG GGGTTATTCT TTCTAGATGA AGCCACATCC
GGCTTGGACC CCAGTACAGA AGAGCAGATC ATGCGTTTGT TACGCAAACT GGCGGATCAG
GGGCGAACCG TGATTCTGAT CACCCACGTG CCAGACAATC TGATGTTGTG TGACGAACTG
ATTTTTCTGG CTTTTGGGGG AAGATTAGCT TATTTTGGTC CCCCGGATCA GATCACGGAA
CACTTTAAAG TCAAAGAATT AAAAGCGATC TATCCCAAGC TGGAGAACGA GAAATCACCG
GATGAATGGC AACAAATCTA TCTCCAATCT TCCCAGTACC AGAAGTATGT TGTTGAACGG
CAAAAACATT TGCAATTAAA TGCTGCTGCC CCCGGTCAAC GTCCGAAACA GCAACTGCCT
CCAACTAAAA TTAAGCAGGC TTCTGACTGG CAGCAATTCT GGATTATGTG TCGGCGTAAT
CTGACGATCC TTTCTCGCGA TCGAGCCAGC CTGATCCTGA TGTTTGCCGT TGCTCCGATT
CTGGGCTGCT TTAACTTCTT CCTCGGCTCT CGGGATACCT TTGATGCCGC AGATGGCGAT
TTGAGCCGTT CCATCCTCTT GCTGTTTATT ATGTCCATGA CCCCTGTGAT TGTGGGCAGT
TTGGCCACCA TGCGGGAGTT GGTCAAGGAG TCAGAGATTT ACAAACGAGA GCGGATGATC
GGCCTTAAAC TGCTGCCCTA TCTCTTTTCT AAGGTGGGAG TGGCGGCCCT GTTTGCCCTT
TATCAGGCAG CGGCCTTCCT TTTATTGGCC TGGATTTCAG TCAATCCTCC CGGAGGACTG
GACGCTTATG TAGGCATGTA CATCACTTTG TTCCTCGCAG TTCTGGCGGG CATGGTGATG
GGCTTGCTGG TTTCTGGAAT CTCTCCCACC CAAAACGTTG CCCCCCTGCT CACCGTTGTC
TTCCTGCTGC CTCAAATCTT CTTTAGTGGT GGCATGATTG CACCCAACAA TTTGCCCTTG
CCCGGACAGG TTCTCAATCA GGTCAGCATT ATCAAATATC CGTTTGAATC CCTGGTGACG
CTGACGGGGA TTGGGCGGGA CATTGCCGAG GATGTCTGTT GGCAGAAGTC TGGGACAGAG
CGGTCAAAGT TAACCGAGGC AGAACAGCAG AAGTGCCAGT GTTTGGGTAC AAATATTTTT
CAGCAGTGCG CTGTACCTGG GATCAGTTCA GAGTATAAAA AGCCGGATAA AAAAGCGGCC
CTGGAGCGTA AGGAACCCGC TAAGCCTCAA GATCCAGGTC CCTTCCCCGA TGATCTATCG
CTCCTGCAAA GCTATAAAGA CAAAATGAAC AAATATCAGG ACGATATGAA GAAGTATCAG
ACTGACTATG CGGACTGGCG CAGCGATCGC GATGAGGTGA TTAAAGGGGC AGAAACCCAG
ATCGATCGGT TTCAACAGGA CTTTGGCGGC ATGCTGAAGG TGAACCTCCT GCAACACTGG
CTGCGGTTAA GCGCAATCAT GGTGGTCATG TTTGGGGCTC TGGTCGTCCT GCAAAAGCGC
AAAGATGTGG TTTGA
 
Protein sequence
MTDAPLVLAH LVISKDHSPP IDFPISTDTV TIGRAKDNLL CLDDPLISRY HARLSQDSRG 
WSLTDLGSAE KTLVNGIEVL PRTPVPLDEG DLIEIGSFEL RFSQEHHEGV SATGTAVTIM
AQQAAEGTVV AAIPLVPILR VVTPNWTKDF PLEKDIVRLG RDPQSDIVID APVVSSNHAQ
IKRTPAGYEI LDLDSLNGLA FNGRLVKERL LQLGDVIYIG TSVTLLYQTK QFQEDSEPVK
LLNLRDRDRW TLGRDSQNDM VIDHPMVSRC HARIERKKNA LVLTDLGSTN GTFVNGQPIT
AEYFLQPGDT INIGPSRFVF NLDETIVHHV EGNNLRLDAI HLKKVVGEGT ILLNDISLSI
LPREFVVIVG GSGSGKSTLL DALNGFRPAT SGTVLLNQVD LYKNFNAYRT ALGYVPQDDI
IHMELTVTEA LDYAAQLRMP PDTTAQERRK RIEEVIEDLD LGARRDVQVR RLSGGQRKRV
SIGVELITKP GLFFLDEATS GLDPSTEEQI MRLLRKLADQ GRTVILITHV PDNLMLCDEL
IFLAFGGRLA YFGPPDQITE HFKVKELKAI YPKLENEKSP DEWQQIYLQS SQYQKYVVER
QKHLQLNAAA PGQRPKQQLP PTKIKQASDW QQFWIMCRRN LTILSRDRAS LILMFAVAPI
LGCFNFFLGS RDTFDAADGD LSRSILLLFI MSMTPVIVGS LATMRELVKE SEIYKRERMI
GLKLLPYLFS KVGVAALFAL YQAAAFLLLA WISVNPPGGL DAYVGMYITL FLAVLAGMVM
GLLVSGISPT QNVAPLLTVV FLLPQIFFSG GMIAPNNLPL PGQVLNQVSI IKYPFESLVT
LTGIGRDIAE DVCWQKSGTE RSKLTEAEQQ KCQCLGTNIF QQCAVPGISS EYKKPDKKAA
LERKEPAKPQ DPGPFPDDLS LLQSYKDKMN KYQDDMKKYQ TDYADWRSDR DEVIKGAETQ
IDRFQQDFGG MLKVNLLQHW LRLSAIMVVM FGALVVLQKR KDVV