Gene Cyan7425_1514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_1514 
Symbol 
ID7287437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp1352572 
End bp1353708 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content52% 
IMG OID643584514 
ProductRNA polymerase, sigma 70 subunit, RpoD subfamily 
Protein accessionYP_002482245 
Protein GI220906934 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGG CCAACAACGT ACTTGAGGTA CTCGTCGAAC AACCTGACAG CGAATTTGAA 
ACCCTGCTGG CAGACGATCT GGAGACAGAT GATTCCGAAG AACTGCTGGA CGAAGAAGCC
GCCGAGGATG GCGATGGCAA AGCTGGTAAA GGCCGGAGTA CCCGCCGTCG GAGTCAAGCC
AAGAAAAAGC ACTACACCGA AGACTCTATC CGGCTTTATT TACAGGAAAT TGGACGGATT
CGCCTGCTGC GGGCCGATGA GGAGATTGAG TTAGCCCGGA AAATTGCCGA CCTGTTGGAA
CTGGAACGGA TTCGGGAGCA GCTTTACGAC AAGTTGGATC GGGAACCTCA GGATCAGGAG
TGGGCCGGTG AAGTCGATAT GCCCCTGCAA TCCTTCCGTC ATCGTTTGCA TATTGGGCGG
CGGGCTAAGG ACAAAATGGT GCAATCGAAC CTGCGTCTGG TGGTCTCTAT TGCCAAGAAG
TACATGAACC GGGGGCTGTC CTTTCAAGAC CTGATTCAGG AAGGTAGTTT GGGGCTGATC
CGGGCCGCCG AAAAGTTTGA CCACGAAAAG GGCTACAAGT TCTCCACCTA CGCCACTTGG
TGGATTCGCC AAGCCATTAC CCGTGCGATC GCCGATCAAT CCCGTACCAT TCGTCTTCCC
GTTCACCTCT ACGAAACCAT TTCTCGGATT AAGAAAACGA CCAAACTCCT CTCTCAGGAA
ATGGGGCGCA AACCAACGGA AGAGGAAATT GCCACCCGGA TGGAAATGAC GATCGAAAAG
CTGCGATTTA TTGCCAAATC GGCCCAGCTC CCCATCTCTT TAGAAACGCC GATTGGTAAA
GAAGAAGATT CTCGTCTGGG CGACTTTATT GAATCCGATG GTGAAACCCC GGAAGATCAG
GTGTCCAAAA ACCTGCTGCG GGAAGACCTG GAAACCGTGC TTTGCACCCT CAGCCCCAGG
GAACGAGATG TGCTTAAACT GCGCTATGGG CTGGATGATG GGCGGATGAA AACTCTGGAA
GAAATTGGGC AGTTGTTCAA CGTTACCCGC GAACGGATTC GCCAGATCGA AGCCAAAGCT
CTGCGGAAAT TGCGTCATCC CAACCGCAAT AGTGTTTTGA AGGAGTATAT TCGATAG
 
Protein sequence
MTQANNVLEV LVEQPDSEFE TLLADDLETD DSEELLDEEA AEDGDGKAGK GRSTRRRSQA 
KKKHYTEDSI RLYLQEIGRI RLLRADEEIE LARKIADLLE LERIREQLYD KLDREPQDQE
WAGEVDMPLQ SFRHRLHIGR RAKDKMVQSN LRLVVSIAKK YMNRGLSFQD LIQEGSLGLI
RAAEKFDHEK GYKFSTYATW WIRQAITRAI ADQSRTIRLP VHLYETISRI KKTTKLLSQE
MGRKPTEEEI ATRMEMTIEK LRFIAKSAQL PISLETPIGK EEDSRLGDFI ESDGETPEDQ
VSKNLLREDL ETVLCTLSPR ERDVLKLRYG LDDGRMKTLE EIGQLFNVTR ERIRQIEAKA
LRKLRHPNRN SVLKEYIR