Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_1514 |
Symbol | |
ID | 7287437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 1352572 |
End bp | 1353708 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643584514 |
Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
Protein accession | YP_002482245 |
Protein GI | 220906934 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGG CCAACAACGT ACTTGAGGTA CTCGTCGAAC AACCTGACAG CGAATTTGAA ACCCTGCTGG CAGACGATCT GGAGACAGAT GATTCCGAAG AACTGCTGGA CGAAGAAGCC GCCGAGGATG GCGATGGCAA AGCTGGTAAA GGCCGGAGTA CCCGCCGTCG GAGTCAAGCC AAGAAAAAGC ACTACACCGA AGACTCTATC CGGCTTTATT TACAGGAAAT TGGACGGATT CGCCTGCTGC GGGCCGATGA GGAGATTGAG TTAGCCCGGA AAATTGCCGA CCTGTTGGAA CTGGAACGGA TTCGGGAGCA GCTTTACGAC AAGTTGGATC GGGAACCTCA GGATCAGGAG TGGGCCGGTG AAGTCGATAT GCCCCTGCAA TCCTTCCGTC ATCGTTTGCA TATTGGGCGG CGGGCTAAGG ACAAAATGGT GCAATCGAAC CTGCGTCTGG TGGTCTCTAT TGCCAAGAAG TACATGAACC GGGGGCTGTC CTTTCAAGAC CTGATTCAGG AAGGTAGTTT GGGGCTGATC CGGGCCGCCG AAAAGTTTGA CCACGAAAAG GGCTACAAGT TCTCCACCTA CGCCACTTGG TGGATTCGCC AAGCCATTAC CCGTGCGATC GCCGATCAAT CCCGTACCAT TCGTCTTCCC GTTCACCTCT ACGAAACCAT TTCTCGGATT AAGAAAACGA CCAAACTCCT CTCTCAGGAA ATGGGGCGCA AACCAACGGA AGAGGAAATT GCCACCCGGA TGGAAATGAC GATCGAAAAG CTGCGATTTA TTGCCAAATC GGCCCAGCTC CCCATCTCTT TAGAAACGCC GATTGGTAAA GAAGAAGATT CTCGTCTGGG CGACTTTATT GAATCCGATG GTGAAACCCC GGAAGATCAG GTGTCCAAAA ACCTGCTGCG GGAAGACCTG GAAACCGTGC TTTGCACCCT CAGCCCCAGG GAACGAGATG TGCTTAAACT GCGCTATGGG CTGGATGATG GGCGGATGAA AACTCTGGAA GAAATTGGGC AGTTGTTCAA CGTTACCCGC GAACGGATTC GCCAGATCGA AGCCAAAGCT CTGCGGAAAT TGCGTCATCC CAACCGCAAT AGTGTTTTGA AGGAGTATAT TCGATAG
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Protein sequence | MTQANNVLEV LVEQPDSEFE TLLADDLETD DSEELLDEEA AEDGDGKAGK GRSTRRRSQA KKKHYTEDSI RLYLQEIGRI RLLRADEEIE LARKIADLLE LERIREQLYD KLDREPQDQE WAGEVDMPLQ SFRHRLHIGR RAKDKMVQSN LRLVVSIAKK YMNRGLSFQD LIQEGSLGLI RAAEKFDHEK GYKFSTYATW WIRQAITRAI ADQSRTIRLP VHLYETISRI KKTTKLLSQE MGRKPTEEEI ATRMEMTIEK LRFIAKSAQL PISLETPIGK EEDSRLGDFI ESDGETPEDQ VSKNLLREDL ETVLCTLSPR ERDVLKLRYG LDDGRMKTLE EIGQLFNVTR ERIRQIEAKA LRKLRHPNRN SVLKEYIR
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