| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1363 |
|---|
| Symbol | |
|---|
| ID | 7287283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 1183889 |
|---|
| End bp | 1184998 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643584364 |
|---|
| Product | membrane-associated zinc metalloprotease |
|---|
| Protein accession | YP_002482098 |
|---|
| Protein GI | 220906787 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
|---|
| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.233298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTTT TATCGGTTCT GGCAGCGATC GCCGTTCTGG CCGTTTTAAT TGTGGTTCAC
GAGGCTGGAC ACTTTCTGGC CGCCCGCTGG CAGGGAATTC ACGTCAATCG GTTTTCGATC
GGCTTTGGCC CGGTGCTGTG GAAATATCAG GGACCAGAAA CGGAATATGC CCTGCGCGGT
TTTCCTCTGG GGGGATATGT AGGATTTCCC GATGATGACC CGGACAGTGC CATTGCCAAA
AACGATCCCA ACCTGCTGCG GAACCGTCCC GTATTGGATC GGGCGATCGT GATCAGTGCC
GGGGTGATTG CTAACCTGGT GTTTGCCTAT CTGCTGCTGG TCACCCAGGT GGGCATTCTG
GGAGTGCCGC AGGTGAACTA TCAACCGGGG GTGGTGGTGC CCCAACTGGC CGCCGATACC
AGTTCTGCCG CCGCTAAAGC CGGAATCAAA GCGGGAGACA TTATCCTAGC TGCGAATGGT
GAACCTCTGG GGGCCTCAGA AACGGCGCTA CCCCATCTGA TGGAGGTGAT TCGCAACAAT
GGGGGACAAC CGATCGCCTT CAAAATTCAA CGCCAGCAAC AACAGCTCAA TCTCACCGTC
ACCCCAGACG TCAGCCCCGA TGGTAAAGCC CGGATTGGGG TGCAACTTTC GCCCAATGGT
ACGGTGACTC GGCAGCATAC CCTGAATCCG ATCGCGATCA CCGGAGCAGC AGCCACAGAA
TTTGAGCGAA TTGTGCGCTT AACCCTGGGG GGATTTGTCC AGCTATTCAG CCACTTTGAC
CAGGCGGCCA ATCAGGTTTC GGGGCCGGTG GCGATCGTGG CGATGGGAGC CGATATTGCC
CGATCCGATG CCACTCGCCT ACTCCAGTTT GCCGCGCTGA TCAGTATTAA CCTGGCCATT
ATCAATATCC TGCCCCTACC GGCCCTGGAT GGCGGTCAGT TAGCCTTTCT CCTGATTGAA
GCCCTGCAGG GTAAACCGAT TCCCAGTCGC ATTCAGGAAG GTGTGATGCA GACCGGGCTG
GTGCTCTTAC TGGGTCTGGG GATGTTTTTG ATTGTGCGCG ACACCGTTAA CCTGGCCAGC
ATGACCTGGG TACAGCGATT ATTCCAGTAA
|
|---|
| Protein sequence | MSFLSVLAAI AVLAVLIVVH EAGHFLAARW QGIHVNRFSI GFGPVLWKYQ GPETEYALRG
FPLGGYVGFP DDDPDSAIAK NDPNLLRNRP VLDRAIVISA GVIANLVFAY LLLVTQVGIL
GVPQVNYQPG VVVPQLAADT SSAAAKAGIK AGDIILAANG EPLGASETAL PHLMEVIRNN
GGQPIAFKIQ RQQQQLNLTV TPDVSPDGKA RIGVQLSPNG TVTRQHTLNP IAITGAAATE
FERIVRLTLG GFVQLFSHFD QAANQVSGPV AIVAMGADIA RSDATRLLQF AALISINLAI
INILPLPALD GGQLAFLLIE ALQGKPIPSR IQEGVMQTGL VLLLGLGMFL IVRDTVNLAS
MTWVQRLFQ
|
|---|
| |