| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1346 |
|---|
| Symbol | mnmA |
|---|
| ID | 7287266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 1165440 |
|---|
| End bp | 1166546 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643584347 |
|---|
| Product | tRNA-specific 2-thiouridylase MnmA |
|---|
| Protein accession | YP_002482081 |
|---|
| Protein GI | 220906770 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
|---|
| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACT CTGGGCAAAA TCAAACTGAG CAAAATAAAA GTGTTGTGGT GGGACTGTCG
GGAGGTGTGG ACAGTTCTGT GGCTGCAGCC AGTTTACATC ATCAGGGCTA CCGGGTGGTG
GGGTTGACCC TATGGTTGAT GAAAGGTAAG GGGCAGTGCT GCTCTGAAGG ACTGGTAGAT
GCGGCGCAAC TCTGCGAGGA ACTGGGGGTT CCCCATCATA TTGTCGATAG CCGGGAGTTG
TTCCAGTCCC AGATTGTTGA CTATCTGGTA GCGGGATATT CTGATGGGAT CACGCCCCTG
CCCTGTTCGC AGTGTAATCG CACCGTCAAG TTTGGGCCGA TGCTCCACTA TGCTCAAACC
GAACTGGGAA TTGAAACCAT TGCCACGGGC CATTACGCCC GCATTACAGT TGATCCCCAG
ACGGGCCGTT ACCAGTTACG CCGGGCCGTG GATCGGAGCA AGGATCAGTC CTATTTTCTC
TACGATCTCA CCCAGGCACA TCTGGCCCAT ACCCTCTTTC CCCTGGGGGA ACAAACAAAA
GCGACCACGC GCCAGATTGC GGCTCAGTTT AATCTGCATA CGGCTGAAAA ACCGGAAAGT
CAGGATCTGT GTTTGATTGA AACCCACGGG TCCATGCAGG CTTTTCTGGA CAAATATATC
AACCCAATCC AGGGGGAAAT TGTCGATCGG CAGGGGCGCG TACTGGGTTA TCACCAGGGT
ATTCACCACT ATACGATCGG GCAACGCAAA GGGCTGGGTA TTGCTGCGGC TCAACCCCTC
TATGTGATTG GTCTGGATCG GGCGATGAAC CGGGTGATTG TCGGCGATCG GGAGGAAGCG
GTGCAGTCTG AATGTACAGT GCAGCGGGTG AACTGGGTGT CGATTGCCCC ACCGGATGCC
CCCATTGCCG CTGAGGTGCA AATTCGTTAT CGCTCCAGCC CTGTGCCTGT GACCGTTGTA
CCCCTGCCCG AGGAAGAGGG TCGAAGCAAT CGCGTTAAAC TGATATTTGA CCAACCGCAA
TTTGGCATTA CTCCCGGTCA GGCAGCGGTC TGGTATCAAG GTGATGTGCT GCTGGGGGGC
GGAATTCTGG AACGTTTTAC GACTTAA
|
|---|
| Protein sequence | MQNSGQNQTE QNKSVVVGLS GGVDSSVAAA SLHHQGYRVV GLTLWLMKGK GQCCSEGLVD
AAQLCEELGV PHHIVDSREL FQSQIVDYLV AGYSDGITPL PCSQCNRTVK FGPMLHYAQT
ELGIETIATG HYARITVDPQ TGRYQLRRAV DRSKDQSYFL YDLTQAHLAH TLFPLGEQTK
ATTRQIAAQF NLHTAEKPES QDLCLIETHG SMQAFLDKYI NPIQGEIVDR QGRVLGYHQG
IHHYTIGQRK GLGIAAAQPL YVIGLDRAMN RVIVGDREEA VQSECTVQRV NWVSIAPPDA
PIAAEVQIRY RSSPVPVTVV PLPEEEGRSN RVKLIFDQPQ FGITPGQAAV WYQGDVLLGG
GILERFTT
|
|---|
| |