| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1278 |
|---|
| Symbol | |
|---|
| ID | 7287199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 1116129 |
|---|
| End bp | 1117292 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643584283 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
|---|
| Protein accession | YP_002482017 |
|---|
| Protein GI | 220906706 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCATGT TGATCTCGAC TTTCTTGCTC ATGTTGCCAC TTCAATGCTT CCGCACCCGA
CTGATGGTAT TTAAACCCCT ATTCAAACTG ATCAGTGTGG TTTTGCTCCT GCTGTTGGTG
CTTAACTCTC CCCTGGCTCA GGCGTCACCC CTGCCGACGG GCTTGGCCAG TCTACCCACT
GGTAATGCCA TTACAGACCC CAAAGCCTTA CTGCGTCTAT CTTTACCCAT TCAAAACTCT
GCAGTCAGAC GACTTCAGGC TGATATAGAG GACATTGCCA ATCAACTACG GGGAAAACGC
TGGGCCACAA TTAATTCAGA GATTGCCAAA GGAGCAACGA TCGTCCGGGA TCGCAGCGCC
GATCTGCTGG CCAGCATTCC ACCCCAGAAC CAACCCCAGG CCCAGGTGAT CTTGAATCAG
CTACAAGCCC AGCTCAACGA GCTTCAAGCT GTTGCCGAAA GCAAGAATCG CGAACAAGTG
TTGCAAAAGA GATCCCTGGT TTTAGATCTG GTGGGCGATT TGGAAGCATT AATGGTTCAG
GGTTTCCCTT TTAACGTACC GCCAGAATAT AGTTCTCTAC CCCAACTGCT GGGCCGGGCA
ACCATTGCAC TGCAGACCAA CAAAGGTGAA CTGACTCTGG TTGTGGATGG TTACAGCGCT
CCGCTGACGG CGGGTAACTT TGTCGATCTA GTGCAACGGG GCTTTTATGA TGGGTTGAAA
TTCACCCGAG CTGAGGAATC CTACGTTTTA CAGGCAGGCG ATCCCCCCGG TAAAGAGGAA
GGCTTTGTCG ATCCTAAAAC TGGCCAATAC CGGGCTATCC CACTGGAAAT TCTGATTCAA
GGGGATAAAA AACCTCTCTA TGGAATGACC CTGGAGGATG CCGGACGCTA CCTGGATCAG
CCAGTTTTGC CGTTCTCTGC CTACGGTACC CTTGCCCTTG CCCGCCCCAG TGACGATCCC
AATGGTGGCT CCTCTCAGTT TTTCTTTTTA CTTTTTGAAC CTGAACTTAC CCCCGCCGGG
TCAAATCTGC TGGATGGCCG CTATGCCGTA TTTGGCTATG TGGTTGAAGG GGCAGAGGTC
CTGCGCGAAC TCCGTCAAGG TGATCAAATT ATCTCCGCCC GTGTTACGGC TGGGGCAGAA
AACCTCGTCA CTCCGTCCGC ATAA
|
|---|
| Protein sequence | MLMLISTFLL MLPLQCFRTR LMVFKPLFKL ISVVLLLLLV LNSPLAQASP LPTGLASLPT
GNAITDPKAL LRLSLPIQNS AVRRLQADIE DIANQLRGKR WATINSEIAK GATIVRDRSA
DLLASIPPQN QPQAQVILNQ LQAQLNELQA VAESKNREQV LQKRSLVLDL VGDLEALMVQ
GFPFNVPPEY SSLPQLLGRA TIALQTNKGE LTLVVDGYSA PLTAGNFVDL VQRGFYDGLK
FTRAEESYVL QAGDPPGKEE GFVDPKTGQY RAIPLEILIQ GDKKPLYGMT LEDAGRYLDQ
PVLPFSAYGT LALARPSDDP NGGSSQFFFL LFEPELTPAG SNLLDGRYAV FGYVVEGAEV
LRELRQGDQI ISARVTAGAE NLVTPSA
|
|---|
| |