| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1219 |
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| Symbol | |
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| ID | 7287140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | + |
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| Start bp | 1056295 |
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| End bp | 1058673 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643584225 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_002481959 |
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| Protein GI | 220906648 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTCCCG TTGATTCTCC CGATTGTAAG ACCTTGACCC ACCCCATCGA ACCGAATCGT
TTCCCTGCAG CTATCCCCCA GTGGCAGAGC GAGGCCCGTT GTGAGCAAAT TGTTGCCAAT
AACATCGCAG CCATTTATCG TTACCTCTGC AGTCCAGATG GCAGCCAAGG CTTTGTCTAC
ATCAGTGCTG GCTGTGAAGA GATTTATGAA ATTGCGGCTG ACCAGATTGT CCAGAATGCC
CAGCTCGTCT GGAGCTTAAT TCATCCCGAA GATCGCAGGG AGTTTGAGGA GGCAATGACC
GCGGCCTTGA TCTGCCTTAC CCCTTGGTGG AATGAACATC GGCTGATCAC CCCCTCCGGC
CAACTAAAAT GGCTGCGTTT CTCTTTACAA CCAAAACTGC AAGCGGATGG CACGATCGTC
TGTGATGGGA TGATCCTGGA TATCAGCGAT CGCAAACGCC AGGAGTCCGA ACGCAAACAG
GCCGAACAAG CGTTAATGAA ACGGGAACGC TACCTGTCCA CCCTGGTCGA AATTCAGCAG
CGCTTACTGG CCCTGAACAG TTCCGAGGGC AATTTCTACA ATCACGTTCT GGAACCGTTA
GGTAAAGCCG CTGAAGCCGA TCGGGTTTAT GTGTTTGAGA ATAGTTGGAA TGGCCAGGGG
CAGTTCTGTA CCAGCCAGAA AGCGGAGTGG TGTGCAGCCG GTATTCCAGC CCAAATCGAT
AATCCAGACC TGCAGAACAT GCCCTATGCA GAGTTTGTTC CCCGCTGGCT AACCCTCCTG
GGGCAGGGCG GCATTGTGGC AGGGCAGGTG GCAGATTTTC CTCTACAGGA GCGAGTCATC
CTGGAACCCC AGGGCATCGT TTCCCTCCTG GTTCTTCCCC TCTTTGTCCA CCATCAGTTC
TTTGGCTTTA TTGGTTTTGA CAATTGTAAG CAGGATCGGC TGTGGGAACC CTCTGATATT
GACCTCTTAC AAGCAGCGGC GGCGGCGATC TCCCTGTCCC TGGAACGCCA GCAGGCCAAT
GCTCAGTTAG TGACGGTCTC GCTGCGGGAT GCCCTCACCA GTCTGCCGAA TCGTACCCTG
CTGTTCGATC GTTTAGAACA CGCCCTGCAG CGATATCAGC GTCATCCCCA GCAGCAATTT
GCCGTGCTTT TCCTGGACAT GGATCGGTTC AAATCGATTA ACGATAGTTT GGGCCATACG
GCGGGGGATC AAGTCTTGCT GGAAATGGCC CATCGGCTCA GCCAGAGTGT ACGGGAAGAG
GATACTGTTG CCCGGCTGGG TGGGGATGAA TTTGTGATTC TCCTGGAAGA GGTGATGAAT
CTGCAGGATG CCCTCCACTG TGCCCAGCGA ATTCAGGACA TTCTGGCTGT CCCGTTTGAA
CTGAATGGCA CGGTTGTTTC TCTGGATGCC AGCATTGGAG TTGCCCTGGC GGATGCCCGT
TACCATACCC CGGAGGAACT GTTGCGGGAT GCCGATATTG CCATGTATGA AGCCAAGGCG
GCGGGGCGAG GCGGGTATCA GGTTTTTGCT CCCCAGATGC ATGAGCAGGC AAAGTTGCGC
TTACAAAAAG AGCAAGATCT GCGGTTGGCC TTGAGAAAAG AGCAATTTCA GGTCGTTTAT
CAACCGATCG TCAATCTGTT AAACCACGCC CTGTTGGGGT TTGAAGCTCT GATCCGCTGG
CAGCATCCCC AGGGAGTGCA AATTCCGGTG CCAGAGTTTC TGACGATCGC CGATCAGCTG
GGTTTGCTGG TGAAGCTGGA ATGGTGGGTG CTGCAAACTG CCTGCGAACA ATTGGCCCAA
TGGCAGAGCT TACCTGGTCT GGCAGGAAGA CCTCTGAGTG TGAGTGTGAA TGTCTCCAGT
ACCCTGTTTG CCCAACCCAA TTTGGTTCCA GAAGTTGCTC GGCTGATTCA GCAGTTCAAG
CTGCCCCCTC AAGGCCTCAA GTTAGAAATT ACTGAAGGGG TGATTGGTGC GAATGCGGAT
GTGGCGCTGG AAAATGGCCA GGCCCTGCAA TCCCTGGGGG TCCAACTTCA CATTGATGAT
TTTGGCACCG GCTACTCTTC CCTTAAACGG CTGCACCAGT TTCCGGTCCA TGCCCTGAAG
ATCGATCGGT CTTTTGTCCG CCATCTCGAT CAGTCCAGCG AAAATCGCGA AATTGTCCGG
GCGATCGTCT CCCTGGCCAA CACTCTGGGC ATTGATGTGA TTGCCGAAGG GATTGAAACC
GAACAGCAAT GTCACTATTT GCAAACGCTG GCCTGTCAGC AGGGTCAGGG CTACTGGTTC
GCACCTCCCT TAACCACCGC TGAGGTTGAA CAGATGCTGC TACAGATCCA GGCGGATCAT
CCCTGGGGGC TTAAACCAGG TTTCTTGCCG CGATCGTGA
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| Protein sequence | MSPVDSPDCK TLTHPIEPNR FPAAIPQWQS EARCEQIVAN NIAAIYRYLC SPDGSQGFVY
ISAGCEEIYE IAADQIVQNA QLVWSLIHPE DRREFEEAMT AALICLTPWW NEHRLITPSG
QLKWLRFSLQ PKLQADGTIV CDGMILDISD RKRQESERKQ AEQALMKRER YLSTLVEIQQ
RLLALNSSEG NFYNHVLEPL GKAAEADRVY VFENSWNGQG QFCTSQKAEW CAAGIPAQID
NPDLQNMPYA EFVPRWLTLL GQGGIVAGQV ADFPLQERVI LEPQGIVSLL VLPLFVHHQF
FGFIGFDNCK QDRLWEPSDI DLLQAAAAAI SLSLERQQAN AQLVTVSLRD ALTSLPNRTL
LFDRLEHALQ RYQRHPQQQF AVLFLDMDRF KSINDSLGHT AGDQVLLEMA HRLSQSVREE
DTVARLGGDE FVILLEEVMN LQDALHCAQR IQDILAVPFE LNGTVVSLDA SIGVALADAR
YHTPEELLRD ADIAMYEAKA AGRGGYQVFA PQMHEQAKLR LQKEQDLRLA LRKEQFQVVY
QPIVNLLNHA LLGFEALIRW QHPQGVQIPV PEFLTIADQL GLLVKLEWWV LQTACEQLAQ
WQSLPGLAGR PLSVSVNVSS TLFAQPNLVP EVARLIQQFK LPPQGLKLEI TEGVIGANAD
VALENGQALQ SLGVQLHIDD FGTGYSSLKR LHQFPVHALK IDRSFVRHLD QSSENREIVR
AIVSLANTLG IDVIAEGIET EQQCHYLQTL ACQQGQGYWF APPLTTAEVE QMLLQIQADH
PWGLKPGFLP RS
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