| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1165 |
|---|
| Symbol | |
|---|
| ID | 7287085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 1001814 |
|---|
| End bp | 1004255 |
|---|
| Gene Length | 2442 bp |
|---|
| Protein Length | 813 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643584173 |
|---|
| Product | single-stranded-DNA-specific exonuclease RecJ |
|---|
| Protein accession | YP_002481908 |
|---|
| Protein GI | 220906597 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
|---|
| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGAAC CACCCATTAC CTGGCAAATG CCGCCTTCTA GCCCTGCTCC GGTGGAGTTT
GTGCAGCAGG TGGTTTCCTG TCTTCCCGGT ATTGCTAACC CCAAAGCCGC ATATACAGCG
CAACTCCTCT GGCAACGCGG TATCCGCGAT CGAGACCAGC TCCAGGGGTT TCTCGACCCT
GATCATTACC AACCCGCCAG TCCATTCCAG TTTGCTCAGA TGATGCTAGC GGTGGAGCGA
CTGCAGCGGG CCCGACAGCG GGGTGAAAAG GTAGCGATCT GGGGAGACTT TGATGCGGAT
GGGATTACGG CAACGGCGGT GCTGTGGGAA GGGTTAGGCA ATTTTTTCAT TCAGGAAGAA
CAGTTAATTT ATACGATTCC CAATCGCCTG ATTGAATCCC ATGGGCTGAA TTTAGCGGGG
ATCGATCGGC TCAAAGCGGC AGGTTGTACC TTGATCGTCA CCTGTGACAC GGGCAGTACG
AATCAGACTG AAATTGAGTA TGCCAACAGT TTGGGGATGG ATGTGATTGT GACCGATCAC
CATACTCTGT CCCCCATTCC GCCCCCTGTG GTCGCCCTGA TCAATCCCCG CGAGTTTGAA
GCGGACCATC CCCTGGCCCA TCTCTCCGGT GTGGCGGTTG CCTACAAGCT GGTTGAAGCC
CTTTACCTTA CCCTGCCGGA GGTTCCCCTC GCTCCCCTCA CCGATTTACT GGATCTGGTG
GCGATCGGGC TGATTGCTGA TCTGGTGCAA TTGCGGGGAG ACTGCCGCTA TCTGGCCCAG
CGTGGCATTG CCCAATTGCA AAAACAACTG CAAAATCCGA CCCGTCCTGG TGTGGCCAAG
TTGCTGGAAC TCTGTCGTAA AACCGGCGAT CGCCCCACGG ACATTTCCTT TGGTTTGGGA
CCGCGGATCA ATGCTGTCAG CCGCATTCAG GGGGATGCTC ACTTTTGTGT GGAATTGCTC
ACCAGCTGGG AGGTCGATCG CTGTAATGAA CTGGCCCTGG AAACGGAATT AGCCAATACC
CGCCGCAAAG CCTTACAAAA AGAAACTGTC ACTCAGGTGC GTCGCCAACT GGAACGGCTG
GATCTGTCCA CCACACGGGC GATCGTCCTG GTCGATAGTC AGTGGCCTGC TGGTATTCTC
GGTCTGGTGG CCGGACAAAT TGCCCAGGAG TATGGCTGTC CAACGGTTTT ACTCCATGCC
GATGACCTGG ACGATCGAGA TGGCCAAACC CTGGCTAAGG GATCGGCTCG ATCGGTGCAG
CAAATTGATC TGTATGCTCT CTTTGCGGAA CAGCAACACC TCCTGCATCG CTATGGGGGC
CATCCCCTGG CAGCCGGACT GAGTTTACCC CTGGCCAATG TCCCCTTGTT TAGGCAGGCG
CTCAATCACA AACTGGGTCA GTACCCCCAC CTGGAGACTC GAGCTGGAAG CATCAGCATT
GATCTGGTGG TTACAGTAGC GGATCTGATC GGGGAGGGCA ATCGGCCGGG CGAAGACCTG
TTTCAGGCCT TAAAACTGCT GGAACCCTAC GGCATGGGCA ACCCGGCCCC CCGTTTAATG
ATCAGTAACT GCTGGGTTGA AAACCCATGG AATCAAAACC TCAAGGATCT GCAGGGCAAC
AAATTACGCT ATATCAAAAC TGAATTTCGG CTAAGGGATG AAACCACGGA TCAAAGTTTT
CCTGGGGTCT GGTGGGAGCA TTATCGTGAA GAGTTACCCC AGGGGCGGGC GGATGTCGTC
GTCGAACTGG ACTTTAACAG CTATGCCAAT CCTCGAAGAG GGATTCAACC CCGCTATGAA
ATTCGTTTGA TTGCCGTGCG TCCCCATCTG GACAACCCCA TGACTGCCAG AGAAACTGAG
CAAAACTGGT TACTGGACTG GCGCACAACT CCCCACCCCC CTGCGGCTAA TATTCTTCAG
CTCAATTCTT GTCCCGATAG TTGGGATGAT TTACGCTCCT GGCTGCGTCG GGCAATTGCA
ACCCATCAAA AGCTGGCGAT CGCCTATGCG CCTCCCCCCC AAAAAACACC CCTCCAGGTC
TGGACTGAAC TGGTAGGCCT GGCCAAATAT CTCAGCCGTA CGAGTCAATC GGTCACTTAT
CAACAATTGC AGGACAAGCT AAATCTCAGT TTTCGTACTC TCCAGTTGGG TTTACAGGCT
TTGTCTACGC TAGGATTCAG GGTCGATGCT GCAGAAATAC CTGGCCCTAT GACGGAAGAT
AGCTTAACAG AAACGGCATT TACGCTGACC TACACCCCAG CCACAGCGAC GGAAGCAGCC
ATGAACCCCA CCCAGCAGCA GTTTTTCCAG GCCCTGCAGG AAGAGCAGTT TCGTCGTCAG
TATTTCTATC AGGTGCCCCT CGCCACCCTG CAGGCCATCG CTGCTCAATC TCTCCATCAG
ACTGAGGCTG AATATGGTGC AAATCCCAGA TCTACAGGTT GA
|
|---|
| Protein sequence | MPEPPITWQM PPSSPAPVEF VQQVVSCLPG IANPKAAYTA QLLWQRGIRD RDQLQGFLDP
DHYQPASPFQ FAQMMLAVER LQRARQRGEK VAIWGDFDAD GITATAVLWE GLGNFFIQEE
QLIYTIPNRL IESHGLNLAG IDRLKAAGCT LIVTCDTGST NQTEIEYANS LGMDVIVTDH
HTLSPIPPPV VALINPREFE ADHPLAHLSG VAVAYKLVEA LYLTLPEVPL APLTDLLDLV
AIGLIADLVQ LRGDCRYLAQ RGIAQLQKQL QNPTRPGVAK LLELCRKTGD RPTDISFGLG
PRINAVSRIQ GDAHFCVELL TSWEVDRCNE LALETELANT RRKALQKETV TQVRRQLERL
DLSTTRAIVL VDSQWPAGIL GLVAGQIAQE YGCPTVLLHA DDLDDRDGQT LAKGSARSVQ
QIDLYALFAE QQHLLHRYGG HPLAAGLSLP LANVPLFRQA LNHKLGQYPH LETRAGSISI
DLVVTVADLI GEGNRPGEDL FQALKLLEPY GMGNPAPRLM ISNCWVENPW NQNLKDLQGN
KLRYIKTEFR LRDETTDQSF PGVWWEHYRE ELPQGRADVV VELDFNSYAN PRRGIQPRYE
IRLIAVRPHL DNPMTARETE QNWLLDWRTT PHPPAANILQ LNSCPDSWDD LRSWLRRAIA
THQKLAIAYA PPPQKTPLQV WTELVGLAKY LSRTSQSVTY QQLQDKLNLS FRTLQLGLQA
LSTLGFRVDA AEIPGPMTED SLTETAFTLT YTPATATEAA MNPTQQQFFQ ALQEEQFRRQ
YFYQVPLATL QAIAAQSLHQ TEAEYGANPR STG
|
|---|
| |