| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1052 |
|---|
| Symbol | trpD |
|---|
| ID | 7286971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 866423 |
|---|
| End bp | 867481 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643584063 |
|---|
| Product | anthranilate phosphoribosyltransferase |
|---|
| Protein accession | YP_002481799 |
|---|
| Protein GI | 220906488 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.659379 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0313963 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTTAC CGGTGAATCC AACTCCAGTG AACGAGCCGC CTCTCTGGCC GCTGATGTTG
CAGCAATTGC TCGATCGTCA GTCCCTCAGT CAGCCACAGG CCAGCCAGTT AATGCAGGGC
TGGTTAGAGG AGCAAATTCC AGAGGTGTTA TCCGGGGCAA TTCTAGCGGC GCTTCAGGCT
AAAGGGGTAT CAGGGCCAGA ACTGGCAGGC ATGGCAGAAA TTTTATTGCA ACAATGCCAC
CCGCTTGACC TGCAACCGAT GGTCCCCCTG GTGGATACCT GTGGAACGGG GGGGGATGGC
GCTTCAACCT TTAATGTTTC CACAGCCGTT GCCTTTGTCG TCGCTGCTGC GGGGGTGAAC
GTAGCTAAAC ATGGCAATCG ATCCGCTTCC AGTCGGGTAG GCTCAGCAGA TGTGCTGGAG
GCCTTAGGGG TACAACTCAC GGCTCCGGCG GCAAAGATTC AAGCTGCGAT CGCCGCCGTG
GGAATTACCT TTTTATTTGC GCCTGGCTGG CATCCGGCTA TGAAAGCCGT GGCCCCATTG
CGTAAAACCC TGCAAATCCG CACTGTCTTC AACCTGCTTG GCCCCCTGGT CAATCCCCTC
CGCCCCACTG GTCAGGTGAT GGGAGTTTAC AGTGCCTCAC TGTTAAGCCC GATCGCAGAA
GCCCTCAACC TGCTCGGTTT GCGCCAGGGA ATTGTGCTGC ATGGGCGGGA ACGGCTGGAT
GAGGCCGGGT TGGGAGACGC AACGGATCTG GCGGTTCTGA CTGAGGGGCA GGTCAAAATT
GATCTCCTCG ACCCCCAGGA GTTAGGTTTA ACACCAGCTC CCTTAGCTGC CCTTAAAGGG
GGAGATGTAA ACGAAAATGC GGCGATTCTC AAAGCTGTGC TCCAGGGTAA GGGAACCGTA
GCCCAACAGG ATGTGGTAAC ACTCAATGCG GCTTTAGCCC TCTGGGTCGG TGAGGCTGTC
TCCAGTTATC GTCAGGGAAT GGTGCTTGCC CGACACGTTT TAGAGCATGG AGCCGCCTGG
ATGAAGCTAG AACAACTGGT TAAATTTCTG AACTCCTAG
|
|---|
| Protein sequence | MHLPVNPTPV NEPPLWPLML QQLLDRQSLS QPQASQLMQG WLEEQIPEVL SGAILAALQA
KGVSGPELAG MAEILLQQCH PLDLQPMVPL VDTCGTGGDG ASTFNVSTAV AFVVAAAGVN
VAKHGNRSAS SRVGSADVLE ALGVQLTAPA AKIQAAIAAV GITFLFAPGW HPAMKAVAPL
RKTLQIRTVF NLLGPLVNPL RPTGQVMGVY SASLLSPIAE ALNLLGLRQG IVLHGRERLD
EAGLGDATDL AVLTEGQVKI DLLDPQELGL TPAPLAALKG GDVNENAAIL KAVLQGKGTV
AQQDVVTLNA ALALWVGEAV SSYRQGMVLA RHVLEHGAAW MKLEQLVKFL NS
|
|---|
| |