Gene Cyan7425_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_0858 
Symbol 
ID7286774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp679569 
End bp681425 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content55% 
IMG OID643583867 
Productpenicillin-binding protein, 1A family 
Protein accessionYP_002481605 
Protein GI220906294 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00486988 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00041503 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGGTCCG TCACCCGCAC GGCCAGTAAA ACAATTCTGG TCGCAACCAT GGTGGGAACT 
GCGGCGATCT CAGGGGGATT GGTCGGCTTA GCGATTAGCT TTCGCAACCT GCCAGATGTG
CGTTCACTCA GGGGGTATGT CCCCAGTGAA ACCACCCATA TCTACGATAT CAATGGTAAA
TTGCTGGCCA GCCTGCACGA TGAAGAAAAC CGGGAAGTCG TACCCCTGAA CAAGATTTCT
CCAGATTTAA AGCGGGCGGT GATTGCAATT GAAGACAGTA ATTTTTTTCA GCATCATGGG
ATTAATCCGA TCGGGATTGT GCGGGCTACC CTGGTTAATT TTCAGGCTGG GCGAACCGTA
GAAGGGGGCT CTACCCTGAC CATGCAGTTG GTGAAAAATT TGTTTCTTAC CCCGGAACGG
GCTTTCAGCC GTAAAGTTGC CGAAGCTGTG CTGGCCCTGC GGTTGGAGCA AATTTTTACC
AAGGATGAAA TCCTGGAGAT GTACCTGAAT CAGGTCTACT GGGGTCACAA TACCTATGGG
GTGGAAACCG CAGCGAGAAG TTACTTTCAG AAGTCGGCAG CGGATCTAAC CCTAGGTGAA
GCCGCCATGA TGGCCGGAAT TATCCAGGCA CCAGAGGCGT ACAGTCCCTT TGTCGATTAT
CGTTTAGCCC GGCAACAGCA GGCGATCGTC CTCAACCGTA TGGTGGAATT GAACTGGATT
ACTGCGGCAG AGGCAGAACG GGCTCGCAAC CAACCGATCA AGCTGGGTAA AATCACCTCT
TTCCAGGGGA GCCGCAGCCC CTATGTCACC GATGCTGTGG TGGATGAATT GAGTAAGCGG
TTTGGGCGGG AAGCCGTCAT CAAAGGTGGA ATGCGGGTGC AAACCACGAT CGATTTAAGG
CTACAGCAAA TTGCGGAAAA GGTAGTGCGC CAGGGCCACG CCGATTTGAT TGCCCAGGGA
GTGCAGGCCG ATCAGATGGC TCTGGTGGCG GTTGACCCCC GGACCCACTT TATCAAAGCG
ATGGTGGGTG GGGTGGATTA CCAGAAAAGC CAATTCAATC GTGCTACCCA GGCTTTACGT
CAACCGGGGT CAGCCTTCAA ACCCCTGGTT TTCTACACCG CCTTTGCCAC AGGCAAATAT
ACGCCCGACT CCACCATTGA CGATAACCCA ATCAGCTTTA ATGATGGCAC TGAGCTCTAT
ACGCCCCGCA ACTATGACAA CAGTTTCTAT GGTCCCATGT CTATCCGCAT GGCTTTGGCC
ACATCCCGCA ATATTCCAGC GGTGAAATTG GGGCAGCAAG TTGGAATCAG TAACGTGATT
GAAGTCTGTC GCACCCTGGG GATTAAGAGC GCGATTCCGC CTGTGGTTTC CCTGCCCCTG
GGAGCTGTAG ATCTCACTCC CCTGGAATTG GTCAGTGCCT ATGCCACCTT TGCCAATAAC
GGCTGGCAGT CCGACACCAC GGCTGTTGTC CAGGTTACAG ATAATAGTGG GCAACTTCTA
CTGAACAACT GGCCCCGCCC CAAATTGGTG CTGGATCCCT GGGCAGCGGC TTCCCTCAAC
GATGCCATGC AGTCAGTGAT TACCAGCGGG ACGGGGGTGG CCGCACAAAT CGGTCGGCCG
GCAGCAGGCA AAACGGGCAC CACTTCGTCC GAGCGGGATA TCTGGTTTGT GGGCTATGTT
CCCCAACTGG CTACGGCAGT CTGGGCAGGC AACGACAACT ACTCTCCGAT TGGACGGGGG
GCAACCGGGG GTGGGTTTAT GGCACCGCTC TGGCGTGACT TCATGAGTCA GGCACTCAAA
GGCGTTCCGG TGGAAAAATT TACGCCCGCC TCCCGGTTTG AGCGTCCCCG CTCCTGA
 
Protein sequence
MGSVTRTASK TILVATMVGT AAISGGLVGL AISFRNLPDV RSLRGYVPSE TTHIYDINGK 
LLASLHDEEN REVVPLNKIS PDLKRAVIAI EDSNFFQHHG INPIGIVRAT LVNFQAGRTV
EGGSTLTMQL VKNLFLTPER AFSRKVAEAV LALRLEQIFT KDEILEMYLN QVYWGHNTYG
VETAARSYFQ KSAADLTLGE AAMMAGIIQA PEAYSPFVDY RLARQQQAIV LNRMVELNWI
TAAEAERARN QPIKLGKITS FQGSRSPYVT DAVVDELSKR FGREAVIKGG MRVQTTIDLR
LQQIAEKVVR QGHADLIAQG VQADQMALVA VDPRTHFIKA MVGGVDYQKS QFNRATQALR
QPGSAFKPLV FYTAFATGKY TPDSTIDDNP ISFNDGTELY TPRNYDNSFY GPMSIRMALA
TSRNIPAVKL GQQVGISNVI EVCRTLGIKS AIPPVVSLPL GAVDLTPLEL VSAYATFANN
GWQSDTTAVV QVTDNSGQLL LNNWPRPKLV LDPWAAASLN DAMQSVITSG TGVAAQIGRP
AAGKTGTTSS ERDIWFVGYV PQLATAVWAG NDNYSPIGRG ATGGGFMAPL WRDFMSQALK
GVPVEKFTPA SRFERPRS