Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_0823 |
Symbol | |
ID | 7286739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 641717 |
End bp | 643453 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643583832 |
Product | S-layer domain protein |
Protein accession | YP_002481570 |
Protein GI | 220906259 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000211926 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0522919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAAT CCAACGTCAT CAAAGCCTTA CTCTCCCGTT GCCAAAGCAA GCAGCGATTC TGTCCAGCTC TTTTAGGTGG GGCTATTATC CTCTCCGGCA TGAACCTAAC TGCAGGAGCA ATGGCTCAGA CCGCACCTAC CCAGACGGGA AGTTCCGTGT CCCCCTCCAG TCTCGATCAA ATTAACCTGA ATCAAGTCAA CTTTAATCAG CCCTTCAACC TGCCTCAAGC TTCTCAGCTC ATGGGTGGTG CTGCCCAGGC TCAGGTTACT TCGGTCTCAC AGCTCTCGGA TGTCCGACCC ACGGATTGGG CCTTTCAAGC CTTGCAATCT TTGGTGGAAA AATATGGTTG TATTGCCGGT TATCCCGATG GTACCTTCCG CGGCAATCGT GCTGCAACCC GGTTTGAATT GGCAGCCGCC TTGAATGCTT GTTTAGATGT GATTTCCGAT CGTTTTGTCA GCAAAGAAGA CCTGAATGCA GTCAAAAAAC TACAGGACGA ATTTGCCGCC GAACTTGCGA CTTTACGGGG ACGGGTGGAT GGTCTGGAAG CCCGTGCGGC TAAGTTAGAA GCCCAGCAGT TCTCGACGAC CACCAAACTT TCTGCCGATG CCCTGGTTGC CTTTCAGTAT GGTCGCACCG ATGGCCGCTT TAATACGTTT GATCCAGAAA CCAGTACCTT CAATCGTACT TCTGGTGAGC TAAATCCCAC CGTGGTCAGT GTTGTGCAGT TGAATCTCAA TACCAGTTTT ACGGGAGAGG ACGTTCTGCT CACCACGATC GCTGCCGGTA ACAATGGAGC TGATGCCATA GGCGCTCTGG GCGTTGGGGC TTCCGGATTC ATCAATGCGG GTAGTGTGGA CTATTCGTTC TATCCCAATA CTGTCTACCT GTATCGGCTG GCTTACACGT TTAAACCCAC CGAGGATCTT GCCCTCACCT TTGGACCGCA GTTCTACCCT AGCGATTATG TTGATGCCAA TAGTTACGCC AATGATTCGT TCCAGGATTT TAGCTCTGGG TTCTTTATCA ATAACCGCCT GATTGTTGTC TTTCCTGTGG ATGGGCCGGG GGGGGCTGGA GCCGCCTTTA ACTGGAATCC CAATGGTGGA CCGATCAGTG TGCGGGGCAC CTACGTTGCG GCCAATGCCT TCAGTCCCGT CAAAGATGCC TTTGGAGGAG GATTTTTGGG CGATCCCTAC CAGGGCACCG TGGAGGTGGA ATACGCGAAT AAATTTGGTA AGGAAGGGAA GAACAACTTT GCTGTGCGGC TGCAGTACAC CAACTCGGCC ACCTTTGATG TGGCTCAGAA TGCCGGTGGT CTGAATGTGG AAGCCAGTTT TGGGCAGTTT GGCCTGTTTG GTCGCTATGG TTATTCCGGT GGACAGGTCT ATGGCAGTGG GGCTTTTACC CTGGCTCCCT TTGTCAATCC AGATGATTTT CCGGCTGGCA AGATTAACTT CACGGCTCAG ACCTGGATGG CCGGGGTGGG AGTTCGAGAT TTGCTCCGGG AGGGTTCGCT TCTGGCTGCT GCGGTGGGAC AACCGTTTAT TAACGACTTG CCCAGTTCTC GCGGCAACAA CGATGCCACT CAGACTAACT ACGAAGCTTT CTTCCGCTTT CCGGTTAACG ATAACATCAC CGTTACCCCG GTGATCATGG CTATTACCAA GGCGAACAAT GATTCGACCA ATGCCGCCAT TATTCAGGGG GTTCTCCGCA CAACTTTTTC CTTCTAA
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Protein sequence | MFKSNVIKAL LSRCQSKQRF CPALLGGAII LSGMNLTAGA MAQTAPTQTG SSVSPSSLDQ INLNQVNFNQ PFNLPQASQL MGGAAQAQVT SVSQLSDVRP TDWAFQALQS LVEKYGCIAG YPDGTFRGNR AATRFELAAA LNACLDVISD RFVSKEDLNA VKKLQDEFAA ELATLRGRVD GLEARAAKLE AQQFSTTTKL SADALVAFQY GRTDGRFNTF DPETSTFNRT SGELNPTVVS VVQLNLNTSF TGEDVLLTTI AAGNNGADAI GALGVGASGF INAGSVDYSF YPNTVYLYRL AYTFKPTEDL ALTFGPQFYP SDYVDANSYA NDSFQDFSSG FFINNRLIVV FPVDGPGGAG AAFNWNPNGG PISVRGTYVA ANAFSPVKDA FGGGFLGDPY QGTVEVEYAN KFGKEGKNNF AVRLQYTNSA TFDVAQNAGG LNVEASFGQF GLFGRYGYSG GQVYGSGAFT LAPFVNPDDF PAGKINFTAQ TWMAGVGVRD LLREGSLLAA AVGQPFINDL PSSRGNNDAT QTNYEAFFRF PVNDNITVTP VIMAITKANN DSTNAAIIQG VLRTTFSF
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