Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_0810 |
Symbol | |
ID | 7286726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 627061 |
End bp | 629583 |
Gene Length | 2523 bp |
Protein Length | 840 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643583819 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_002481557 |
Protein GI | 220906246 |
COG category | [E] Amino acid transport and metabolism [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.643579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.828908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAACG CAGGCCAAGC AATTGTGTTC TCTCACCCGT TCGATCCCCA ACCCCCAGAG ACCGTCAAGG TAGGTATTCT CCACTCCCTC AGTGGGACGA TGGCCCTCAG CAGCGCTCCC TTAGTCAAAG CAGCCCTGAT GGCGATCGCA GAAATCAATC AGTCCGGGGG AGTGTTGGGC CGCAGAATTG AACCGATCGT CGAAGATGGC GCCTCCGATC CGGCCGTTTT TGCTACTAAA GCCAGTCGTT TGATTGACCA GGAGCAGGTC TCAACGATCT TTGGCTGCTG GACCTCCCTC AGTCGCAAAG TTGTCAAAGA GATTGTCGAA GCCAGGAATG TGCTGCTCTG GTATCCGATG CAGTACGAAG GGCTGGAATG CTCCCCCAAC ATTTTTTATA CCGGCTCCTG TGCCAATCAA CAGGTGGAAC CTGCTGTCAA CTGGTTGCTA CACCGCAATC GCAAGCGGAT TTTTCTGATC GGTTCAGATT ACGTTTTTCC CCGCACCTTG AATCGAATCA TTGCTGGACA ACTGCAGCAA CAGGGGGGCA CGGTGGCCGG TGAAGCCTAC CTTCCCCTTG GCGATCGGGA TTTCAGCAAA ATTCTGCAGC AAATTGTCTA CCTGCAACCC GAGGCGATCT GCAGTACCCT CAATGGCGAG AGTGGACTAT ACTTTTATCC CCAGTTTCAA GCCGCGGGCT TCACCCCTGC CCAGATCCCG ATTATGGCCC TGAGTATGGG CGAAAACGAA TTTCAAGCCA TTGGGGCAGC GGCGATCGGT CACTACGCTA GCTGGAGTTA TTTTCAAAGC ATTGATACCC CAGCCAACCA GCGTTTTGTC GAAAACTTCC GGGCCTACTG CGGTGCCAAT AGTGTCACCA ATGATCCGAT CGAAACCGCC TACACCCAGA TTTACCTCTG GAAGCAGTCT GTAGAAACCG CCCAATCCTT TCAGGTCAAT AAAGTCCGGC AAGCCGCTTA CGGTCAAACC TTTACAGCCC CAGGTGGACT GATTAAAATC GCCACCAATC ACCACGTCTG GAAAGCCTGC CGGATCGGCC AGTACGGTAG TGACGGACAG TTCAAAATTG TCTATGAAAC GGATGCTCCC CTTCCTCCGT TACCCTGGCT AGGAGTGGAA ACGAAAGATG CCAGCCGCTC CAGCACAGTG ATTAAATTGC TAGAAGAAGT ATCCCAGGGG ATTCACTATA GCTGGCAACT GGAACAAAAA TCCCGCCAGC TGGAAGCGGC CCTGCATCAA CTTCAGGAAG AAACCCGACA ACGGACTCGC TTGGAAGCCG AACGGCAGCG GTCAGAAATT GCCTTAAGGG AATCAGAGGA ACGCTATCGC AGTATTTTTG AACGGGCAGT GGAAGGTATT TTTCAAACCA CTTTAACAGG GGAGTATCTA CAGGTTAATC CATCCCTCGT AAAAATTTAT GGCTATGGTT CCGCCCAAGA CCTAATCGAG CAATTGCAGG CTGAGCAGCT TTATGTTGAT CCCAACCGTC GCCAAGAGTT TATCCGCTTG ATGGAGGAAC AGGAAGCAAT CTCGAACTTT GAATCCCAGG TCTACCGCAA AGATGGTAAG GTGATCTGGA TTGCCGAACA TGTCCGCCTG ATCAGAGATG CGGAGGGCCA TCCCCAGTAC TACGAAGGCA CGGTTCAGGA TATTACCGAG CGCAAGCGAA CGGAACTAGC CCTGGCGGAG GCCAACCAGC AAATTACGCG GTTAAATGAG CAATTACAGG AAGAAAACCT GCGCCTGGGG GCAGAGCTGG AAATTACTCG CCGCTTACAG AAAATGATCC TGCCCAAAGC AGAAGAACTA CAGGCCATTC CCCATCTGGA TATTGCCGGC TTTATGGAAC CTGCGACGGA AGTAGGGGGA GACTATTACG ACGTTTTACA GCACAATGGT AGGATTAAAA TCGGAATTGG GGATGTGACG GGACACGGCT TAGAAAGTGG CTTAATGATG CTGATGGCTC AAACCGCCGT GCAGACACTG TTAACAGTAG AGGAAACCAA TCCGGTTGCA TATCTGAATG TGATCAATCA AATCCTCTAC AAGAATGCCC GTCGCATGTG CTCTGGTAAG AACATGACTC TGTCCCTGCT GGATTATGAA CCCCTGGCTG CTTCGGGACG ATTGCGCCTG AGTGGACAAC ATGAAGAATT AATTATTGTG CGTCGCAATG GCGAGATTGA ACAAATTGAT ACCCTCGATT TAGGGTTTCC CCTGGGACTG GAATTCGATA TTTCTGGCTT TATTGCCCAG ACGGAAGTAG AACTGCACCC AGGGGATTTA GCCGTCCTTT ATACCGATGG CGTCACCGAA GCGTTTAACA GCCAAAATCA ACCCTATGGT CTGGAGAGAT TGCGCCAGGT TTTACAGGAG AATCGGGATC ATTCGGCGGC AGAAATTCAG CGAATTGTAG TTGAAGATTT ATTGAATTAT GTTGGTGAAC AGAAGGTTCA TGATGACATT ACCCTGTTGA TTATTAAGCA AAAGGATAGG TAA
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Protein sequence | MVNAGQAIVF SHPFDPQPPE TVKVGILHSL SGTMALSSAP LVKAALMAIA EINQSGGVLG RRIEPIVEDG ASDPAVFATK ASRLIDQEQV STIFGCWTSL SRKVVKEIVE ARNVLLWYPM QYEGLECSPN IFYTGSCANQ QVEPAVNWLL HRNRKRIFLI GSDYVFPRTL NRIIAGQLQQ QGGTVAGEAY LPLGDRDFSK ILQQIVYLQP EAICSTLNGE SGLYFYPQFQ AAGFTPAQIP IMALSMGENE FQAIGAAAIG HYASWSYFQS IDTPANQRFV ENFRAYCGAN SVTNDPIETA YTQIYLWKQS VETAQSFQVN KVRQAAYGQT FTAPGGLIKI ATNHHVWKAC RIGQYGSDGQ FKIVYETDAP LPPLPWLGVE TKDASRSSTV IKLLEEVSQG IHYSWQLEQK SRQLEAALHQ LQEETRQRTR LEAERQRSEI ALRESEERYR SIFERAVEGI FQTTLTGEYL QVNPSLVKIY GYGSAQDLIE QLQAEQLYVD PNRRQEFIRL MEEQEAISNF ESQVYRKDGK VIWIAEHVRL IRDAEGHPQY YEGTVQDITE RKRTELALAE ANQQITRLNE QLQEENLRLG AELEITRRLQ KMILPKAEEL QAIPHLDIAG FMEPATEVGG DYYDVLQHNG RIKIGIGDVT GHGLESGLMM LMAQTAVQTL LTVEETNPVA YLNVINQILY KNARRMCSGK NMTLSLLDYE PLAASGRLRL SGQHEELIIV RRNGEIEQID TLDLGFPLGL EFDISGFIAQ TEVELHPGDL AVLYTDGVTE AFNSQNQPYG LERLRQVLQE NRDHSAAEIQ RIVVEDLLNY VGEQKVHDDI TLLIIKQKDR
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