| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_0676 |
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| Symbol | ligA |
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| ID | 7286585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | + |
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| Start bp | 477467 |
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| End bp | 479683 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643583680 |
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| Product | NAD-dependent DNA ligase LigA |
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| Protein accession | YP_002481425 |
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| Protein GI | 220906114 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.759983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACC TTGAACACGA AGCTGAAAGG GTAGAGATGG CAGCGGCAAC AACGGAAATC
AGACAACGGG TGCTGGAATT GCGCCAACTG GTGCAGCGAG CTAGCTATGC CTACTACGTG
CTGGATGCTC CCATTCTGGA AGATGTCGTT TACGATCAGC TCTACCGGGA ATTACAAGAC
CTGGAAACTC AGTATCCGGA ACTGCTCACA CCCGATAGTC CGACTCAGCG AGTGGGGGAG
CAACCCGCCA CCCAGTTTGT CTCCGTTCAA CACCGCATTC CCCTCTACAG TCTGGAAAAT
GCTTTCGCGG TGGCAGATAT GCAGGCCTGG CAGGATCGGT GGCAACGGCA GGGGCAGGCC
ATCGGTGAAC AAAGCGCCAC TTTACGGTCA CCAGAATACG TCTGTGAGTT AAAAATTGAT
GGGTCTGCCC TGGCCCTGAC CTACGAGAAT GGGGTACTGG TGAGGGGGGC AACGCGAGGA
GATGGGGTTT ACGGCGAAGA TATTACTGCC AATGTGCGGA CGATTCGCTC CATTCCGCTG
CGGTTGGACT GGCCCGATCC TCCTCCAATT GTGGAAGTGC GGGGTGAAGC GTTTTTACCC
CTGGATGTTT TTCACCGCTT AAATCAAGAG CGTGAGCAGG CGGGAGAAAG TTTATTTGCC
AATCCCCGCA ATGCCGCGGC CGGAACTCTG CGCCAACTAG ATGCCCGGAT TGTGGCTAAA
CGACGGTTAG ATTTTTTTGC CTATACTCTG CACCTTCCCC TGGCCTCTGC CCGTTCTGCT
ACTCAACCCG CTGCTGCTCA ACAATTAGAT TTATTAGCGG TAGCTCAGTC CGATCCGGCG
GTGGCGGCTC AACAGTTAGA TCTTTCATCC GCCAGTCAGG CTGAGTCAGT CACGACTCAT
TTGCCCCAAA CCCAATGGCA AAGTCTGGAG TTATTGCAAC AGATTGGGTT TCGGGTTAAT
CCCCATCGCC AACTTTGTCC CACTCTGGCG GATGTGCGCC AATACTATGA CCACTGGAAT
CACGGCCGCC TCGATCTGCC CTATATGACC GATGGCGTGG TGGTCAAACT GAATAGTCTA
CGGCTGCAGG AACATCTGGG TTTTACCCAA AAGTTTCCCC GCTGGGCGAT CGCCTGGAAA
TATGAACCGG AACAAGCCGT CACCGAGGTG CTGAATATTA GTGTGAATGT GGGGCGAACA
GGAGCCTTAA CCCCGGTGGC TGAACTCCGT CCCGTCCAAC TTGCGGGTAC AACGGTGTCT
CGAGCTACCC TGCACAACCG CGATCGCCTG GCTGAACTGG ATCTGCACAT TGGCGATAAA
GTGGTCATCC ACAAGGCCGG AGAAATTATT CCTGAAATTC TGCAGGTCTT TCCCGAACTG
CGTCCTGCCG ATGCCCGTCC CTATCAACTG CCCACCCATT GTCCAGAGTG CGGTCAACCT
GTGGTGCAGC CTGTGGATGA AGCCGTTACC CGTTGTCTTA ATGTCTCCTG TCCGGCGATC
GTGCGGGGGG CGATCGTCCA TTGGGTGGGG CGGGATGCCA TGGATATTGA TGGAGTAGGA
GAAAAACTGG TGCGGCAGTT AGTGGATCGC GGTCTGGTAA ACTCGGTCGC AGATCTTTAC
CGGCTGACGG TGGCCCAATT GTTAACCCTG GAGCGGATGG GGAACAAGCT GGCGGAAAAA
GTGGTGGCGG CGATCGCCAA GTCCCAGTCA CGACCATGGT CAAGGGTCCT CTACGGTTTG
GGAATTCGCC ATGTGGGGAG TGTCAATGCC CAGGTCTTAA CCACGGCCTT CCCCAGTGTT
GAGCGGCTCA TGGCTGCCTC AGCGGAGGAT ATTGAAGCCG TGCATGGCAT TGGTCCAGAA
ATTGCCCAGT CAATTGTGCA ATGGTTTCAA ACCCCTGCCA ACCATAGCCT GATTGAGCAG
TTGAGTGCCG CTGGTGTGCA GTTAGCCCAG GACACGGTTG CTGTTCCCCC CAGCCAGCTC
CCCCAACCCC TTGCGGGTAA AACCTTTGTC CTGACGGGCA CCCTGCCTAC CCTGAGTCGG
GATGAAGCCA GGTCCATGAT TGGGCAAGCC GGAGGGAAGG TAACCGATTC TGTCAGCAAA
AAAACTGATT TTTTAGTGGT GGGAGCAGAC GCTGGTTCTA AACTAGACAA AGCCGGACAG
TTGGGGATTC CTTGCTTGAG CGAGTCCCAG TTACTTGAAT TACTGGAAGA AACATGA
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| Protein sequence | MSNLEHEAER VEMAAATTEI RQRVLELRQL VQRASYAYYV LDAPILEDVV YDQLYRELQD
LETQYPELLT PDSPTQRVGE QPATQFVSVQ HRIPLYSLEN AFAVADMQAW QDRWQRQGQA
IGEQSATLRS PEYVCELKID GSALALTYEN GVLVRGATRG DGVYGEDITA NVRTIRSIPL
RLDWPDPPPI VEVRGEAFLP LDVFHRLNQE REQAGESLFA NPRNAAAGTL RQLDARIVAK
RRLDFFAYTL HLPLASARSA TQPAAAQQLD LLAVAQSDPA VAAQQLDLSS ASQAESVTTH
LPQTQWQSLE LLQQIGFRVN PHRQLCPTLA DVRQYYDHWN HGRLDLPYMT DGVVVKLNSL
RLQEHLGFTQ KFPRWAIAWK YEPEQAVTEV LNISVNVGRT GALTPVAELR PVQLAGTTVS
RATLHNRDRL AELDLHIGDK VVIHKAGEII PEILQVFPEL RPADARPYQL PTHCPECGQP
VVQPVDEAVT RCLNVSCPAI VRGAIVHWVG RDAMDIDGVG EKLVRQLVDR GLVNSVADLY
RLTVAQLLTL ERMGNKLAEK VVAAIAKSQS RPWSRVLYGL GIRHVGSVNA QVLTTAFPSV
ERLMAASAED IEAVHGIGPE IAQSIVQWFQ TPANHSLIEQ LSAAGVQLAQ DTVAVPPSQL
PQPLAGKTFV LTGTLPTLSR DEARSMIGQA GGKVTDSVSK KTDFLVVGAD AGSKLDKAGQ
LGIPCLSESQ LLELLEET
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