| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_0571 |
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| Symbol | ispD |
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| ID | 7286480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | - |
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| Start bp | 380012 |
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| End bp | 380698 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643583578 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_002481323 |
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| Protein GI | 220906012 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATCTAT TAATTGCAGC AGCAGGCATG GGCAAACGGA TGGGGAGCCA GCGCAATAAG
CTCCTCCTCA CCCTTCTGGG TAAACCTCTC CTGGGGTGGA CTCTAGAAAC AGTGGCCGCC
GCCCAGTCGA TCGAGTGGAT CGGCATCATT GGTCAACCAG AAGACTTCCC GGACTGGCGA
TCGCTACTGG CAGACCTCAA GATTCATCAA CCCATCCACC TGATTACGGG GGGCAGTACC
CGGCAGGAAT CAATTTATAA CGGCTTGCAG GCTCTCCCAG AAGAAGCTGA TCGCGTGTTG
ATCCACGATG GCGCACGCTG TCTGGCCACT CCAGAATTAA TCGATCGCTG TGCCGCAGCT
TTGGACACCT ATGCGGGCTT AGTGGCAGCC ATTCCCGTCA AAGACACGAT TAAAGTGGTG
GATGCCGCCG GTCAGGTGGC CAGTACGCCC GATCGCTCTG CCCTCTGGGC CGCTCAAACA
CCCCAGGGAT TTGTTGTGGA AAAACTCAAG CATTGTCACG CTGAAGGCCG TCGCCAGGGA
TGGGAAGTGA CGGATGACGC GGCCCTGTTT GAAAAATTTA ATCTGCCCGT CCAGATTGTG
ATGGGGGAAG AAACCAATTT GAAAATTACC ACCCCTGTCG ATCTGGCGAT CGCTGAATTG
ATTCTGCACC AACGACTTTC AACCTGA
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| Protein sequence | MHLLIAAAGM GKRMGSQRNK LLLTLLGKPL LGWTLETVAA AQSIEWIGII GQPEDFPDWR
SLLADLKIHQ PIHLITGGST RQESIYNGLQ ALPEEADRVL IHDGARCLAT PELIDRCAAA
LDTYAGLVAA IPVKDTIKVV DAAGQVASTP DRSALWAAQT PQGFVVEKLK HCHAEGRRQG
WEVTDDAALF EKFNLPVQIV MGEETNLKIT TPVDLAIAEL ILHQRLST
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