Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_0213 |
Symbol | |
ID | 7286118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 17477 |
End bp | 19699 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643583221 |
Product | helicase, RecD/TraA family |
Protein accession | YP_002480970 |
Protein GI | 220905659 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.629499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0445082 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAAC AACAGCCTCA ATTAACAGAG TCCCTACAGG GGGTAGTGGA ACGCTTGACC TACCACGCCG AAGACTCTGG CTATACCGTA GCGCGCTTGC AATCACCCCG CAGTCGAGAG TTGATTACGA TCGTTGGGCA TTTTTCCCAG ATCCAACCCG GGCAAACCCT ACAGCTCCAG GGCTTCTGGC GCGATCATCC CCAGTTTGGC GCCCAATTTC AAGTGACCCA GTACCGCGAA ACCAAACCCG CCACCCTGAC TGGGATCGAA AAATATCTGG GCAGTGGCTT AATCAAAGGG GTGGGGCCGG TGACTGCCAA GCGAATTGTG GCCCACTTTG GGCTGGAAAC CCTGGAGATT ATTGAAACTC AGATTGAACG CTTAACGGAA GTTCCTGGCA TTGCCCGCAA ACGGGTCAGA CTGATTCAAT CGGCCTGGGA GAACCAGAAA GCAATTAAGG AGGTGATGCT ATTTCTGCAG GAACACGGTG TTTCTACCAC CTATGCGGTG AAAATTTTTA AGCAGTACGG TCAGGCGGCG ATCGCGACGG TGGGCCAGAA CCCTTATCAA CTAGCCACAG ATATTTATGG GATTGGCTTT GTCACCGCCG ATGGGATTGC CCGTAACCTC GGCATTGATT CCGATTCAGA CTACCGTTAT CGCGCTGGTC TACTCCATAC CCTTTCCGCT GCAGCCGAGG AGGGCCATTG CTTTTTACCC CAGGCGGAAC TGGTGGAGCG CACTGCTAAG TTGTTGCAGC TAGAGGACTA CACGCCTGAT CCCGATCGCT TGCTTGCCTT CACCACAGAG ATGGCTTTAA CTGAAGAAAT TTTGATGCAG GGGGGAAGTG GAGAGCAGCA GGGCCAGTTC ATTTGTTACA AACCTGCCTT TTTTCATGCC GAGCAAAATT TAACGAACAG GTTGCGGGAC TTGCTCAGCC AACCCTTAGA AGTGGACTTA GAGCGGGTGC GTACCTGGAT TGCCCGATTT ACGACTGCAG CGGGAATGGC CCTTGCGCCT CAGCAGCAAC AGGCGGTGGA ACTGGCGGCA ACCCAACGTG TGGTCGTGCT CACGGGTGGC CCCGGTACGG GCAAAACCTT TTGTACCCGG ACGATCGTTG CCCTGTGGAA AGCGATGGGG AAAACGATCG CCCTGGCTTC TCCCACCGGC CGGGCTGCCC AGCGGCTGAG TGAAATGACG GGTCAACCCG CTTCCACCCT GCATCGTCTG CTAGAGTTTG ATCCAAAGAC GATGAACTTT AAGCGCGATC GCGGCAATCC CATTCCTGCT CAGGCGGTGG TGGTGGATGA AGCCTCGATG CTGGATTTAT TTCTAGCCAA CTCTCTCCTC AAAGCTGTTG CCGATCAGGC CCAATTGCTG CTGGTGGGAG ACTGTGATCA ACTCCCCAGT GTCGGGCCGG GCAATGTGCT GGGAGATCTG ATCAGCAGTG GTAAAATTCC TGTGGTGCGG TTGACTCAGG TGTTTCGCCA GGCCCAGTCC AGCAAAATCG TCACCCATGC CCACCAGATT AATCAGGGTC AATTCCCCCC TCTAGAATTT GTCAGCTCCA CCCCCCAATC TGACTGTCTC TGGTTGGCAG CAAAGGAACC GGAACATGGT CTGCAGGCGA TTCAAGAACT GATTCAGGAC TTAATTCCCC ACCTCGGTTT TGATCCCCAC CGCGATGTGC AGGTGCTGGC CCCCATGAGC CGAGGACTGA TCGGTACCCG TAACCTCAAT CAGGTGCTGC AATCCCTGAT AAATCCGTCG GCTCCTGATA AAGCAGAACT AAGTCAGGGG GGGGTAAGCT TACGGGTGGG CGATCGGGTG ATCCAGCAGG TGAATGATTA CGATCGCGAG GTCTTTAATG GCGATCTGGG GGTGATTGCA GCGATCGATC GGGAAGAACA GGAAGTCACG ATCGCATTTG GGACGGGAGC ATCGGTTCGA TCGGTGAAAT ACGATTATGC GGACTTGAAC GAAATTTCTT TAGCCTGGAG CATCACGATC CATAAATCTC AGGGTAGTGA GTATCCTGTG GTGATTCTGC CCCTCTATAT GCAACATTTT GTCTTGCTCA GTCGCAACCT GCTTTACACC GGCTTGACCC GCGCCCGTAA ACTGGCGATT CTGGTTGGTC CCAAACCGGC AATTGCCTAT GCGATCAATC AGGTCAAGGA ACAAAAACGC TACACCTACC TGGCCCGGCG GCTGACTCGT TAA
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Protein sequence | MAQQQPQLTE SLQGVVERLT YHAEDSGYTV ARLQSPRSRE LITIVGHFSQ IQPGQTLQLQ GFWRDHPQFG AQFQVTQYRE TKPATLTGIE KYLGSGLIKG VGPVTAKRIV AHFGLETLEI IETQIERLTE VPGIARKRVR LIQSAWENQK AIKEVMLFLQ EHGVSTTYAV KIFKQYGQAA IATVGQNPYQ LATDIYGIGF VTADGIARNL GIDSDSDYRY RAGLLHTLSA AAEEGHCFLP QAELVERTAK LLQLEDYTPD PDRLLAFTTE MALTEEILMQ GGSGEQQGQF ICYKPAFFHA EQNLTNRLRD LLSQPLEVDL ERVRTWIARF TTAAGMALAP QQQQAVELAA TQRVVVLTGG PGTGKTFCTR TIVALWKAMG KTIALASPTG RAAQRLSEMT GQPASTLHRL LEFDPKTMNF KRDRGNPIPA QAVVVDEASM LDLFLANSLL KAVADQAQLL LVGDCDQLPS VGPGNVLGDL ISSGKIPVVR LTQVFRQAQS SKIVTHAHQI NQGQFPPLEF VSSTPQSDCL WLAAKEPEHG LQAIQELIQD LIPHLGFDPH RDVQVLAPMS RGLIGTRNLN QVLQSLINPS APDKAELSQG GVSLRVGDRV IQQVNDYDRE VFNGDLGVIA AIDREEQEVT IAFGTGASVR SVKYDYADLN EISLAWSITI HKSQGSEYPV VILPLYMQHF VLLSRNLLYT GLTRARKLAI LVGPKPAIAY AINQVKEQKR YTYLARRLTR
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