| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_2371 |
|---|
| Symbol | |
|---|
| ID | 7286090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 2857321 |
|---|
| End bp | 2859147 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643583194 |
|---|
| Product | glucosamine/fructose-6-phosphate aminotransferase, isomerizing |
|---|
| Protein accession | YP_002480943 |
|---|
| Protein GI | 220905631 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.258828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGTA TTATAGGTTA TGCAGGACAC AGGCCGGCCG TTCCCGTTGT AGTGGAAGGG
CTGCGCAGGC TTGAATACCG GGGTTATGAT TCCGCCGGCG TGGCCTTTGT GCGCCAGAAT
GACATCCATG TCGTGCGTGC CATGGGCAAG CTGGCCGCAC TTGAAGAAAA ACTCGCCCAT
GAGCCGGTGA CCACGCCTAC CTGCGCCATG GGGCATACCC GCTGGGCCAC GCACGGCGTA
CCCGCCGAGC GCAACGCCCA TCCCCACCGC AGCAATGACG GCTCCCTGGC CCTCGTGCAT
AACGGCATTA TCGAAAACTA TCAGGAAATA AAGGCGGACC TTTCGGCCAA GGGCTATACG
TTCAGCTCTG AAACCGACAC GGAAGTGCTG GTCAATCTTA TTGCCGAACG CCGCAAGACC
GAGCCGGACC TTCTGCACGC TTTTGCCGCC GCCCTGCGCG AGGCCCACGG GGCCTACGCT
GTCTGCCTTA TGGACAGGAC GGAACCCGGC GTTATCTATG CGGCCCGCAT GTCCGCCCCG
CTTATTTTCG GCCAGGGAAC AGGCGAAAAT TTTGTGGCTT CGGATATTCC GGCATTTCTG
CCGTACACCC GGCAGGTGGT CTTTTTGCAG GACGGGGATC TTGTGCGTGC CACGGCCGAC
AGTTACGAGA TACTCCGGCT TGAGGACCTC AGCCCCGTAA GCCACGAAAC GCAGACCATC
CAGTGGGATA TGCAGGCCGC GCAAAAGGGC GGGTACCGCC ACTTCATGCT CAAGGAAATC
TTCGAGCAGC CGCGCGTCAT CACCGATGGC CTCACCGGCC GCGCACATGC GCAGCAAGGG
CAGGTGCGCC TGCCCGAGCT GGATGCACTG CCTGTGCCGC GCCGCCTGCA CATTGTGGCC
TGCGGCACGT CGTACCACTC CGGCCTGTGG GGACGGCACC TGCTGGAGCA CTGGGCGCGT
GTTCCTGTGC AGGTGGAAAT AGCCTCGGAA TTCCGCTACC GCGATACCCT GCTGCTGGAC
AAGGACGACA TGGTGCTTGT CATCAGCCAG AGCGGTGAAA CGGCCGACAC CCTTGCGGCC
CTGCGCATTG CGCGCCAGAG CGGCGTCACC GTGCTCGGCC TGTGCAATGT GGTAGGCTCG
TCCATTGCCC GTGAGGCCTC AGCCGTGCTT TACACCCAGG CCGGGCCTGA AATCAGCGTG
GCATCCACCA AGGCCATGTG CAGCCAGATG CTCATGCTGA CCCTCATGGC GCTCTATTGG
GGTACGCGCA GGGGTTGCCT GTCTGCCGGG GAGTGCCGTG AACATCTTAC GGTTCTTGAA
AACCTGCCCG CCCTGCTGGA CGACAGCCTG CCCGCCCTGC ACGAACGTGC TAAAGAAATC
GCGCGCAAGT ACTCCCAGGT GCGCAACTTC TTCTATCTCG GGCGGGGGCA TTGCTATCCG
CTGGCTCTGG AGGGGGCGCT CAAGCTCAAG GAGCTTTCCT ACATCCATGC TGAAGGCTAT
GCCGCGGGCG AGATGAAGCA CGGTCCCATC GCCCTCATTG ATCCGGATTT TCCCACTTTT
GCCCTGGCCC TGAATGACGC ACTGCTGCCC AAGGTCAAGT CCAACATGGT AGAGGTGCAG
GCCCGGCAGG GCAAGGTTAT TGCCCTGACC AACAAAGGGG TGGAGCTGGA TGCTGAAGAC
AGGTGGGATA TTCCCGAGCT GCCCGCGCCG CTTTCCGCCT TTGCGGCGTT GCCTGCGCTG
CAGCTTTTCA GCTACGAAAC CGCGGATTAT CTCGGCAAGG ATGTGGATCA GCCCCGAAAT
CTTGCCAAAA GTGTAACGGT TGAATAG
|
|---|
| Protein sequence | MCGIIGYAGH RPAVPVVVEG LRRLEYRGYD SAGVAFVRQN DIHVVRAMGK LAALEEKLAH
EPVTTPTCAM GHTRWATHGV PAERNAHPHR SNDGSLALVH NGIIENYQEI KADLSAKGYT
FSSETDTEVL VNLIAERRKT EPDLLHAFAA ALREAHGAYA VCLMDRTEPG VIYAARMSAP
LIFGQGTGEN FVASDIPAFL PYTRQVVFLQ DGDLVRATAD SYEILRLEDL SPVSHETQTI
QWDMQAAQKG GYRHFMLKEI FEQPRVITDG LTGRAHAQQG QVRLPELDAL PVPRRLHIVA
CGTSYHSGLW GRHLLEHWAR VPVQVEIASE FRYRDTLLLD KDDMVLVISQ SGETADTLAA
LRIARQSGVT VLGLCNVVGS SIAREASAVL YTQAGPEISV ASTKAMCSQM LMLTLMALYW
GTRRGCLSAG ECREHLTVLE NLPALLDDSL PALHERAKEI ARKYSQVRNF FYLGRGHCYP
LALEGALKLK ELSYIHAEGY AAGEMKHGPI ALIDPDFPTF ALALNDALLP KVKSNMVEVQ
ARQGKVIALT NKGVELDAED RWDIPELPAP LSAFAALPAL QLFSYETADY LGKDVDQPRN
LAKSVTVE
|
|---|
| |