Gene Ddes_2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2354 
Symbol 
ID7286073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2835237 
End bp2836025 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content56% 
IMG OID643583177 
ProductIntegrase catalytic region 
Protein accessionYP_002480926 
Protein GI220905614 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTAAGG CATGCGCCAT AGTGCTCATC AGTCGGACGC TGTATGCCTA TGCACCGACA 
CCGCGCGACG ACACCGACGT TATCGAGACG CTTATCCGGT TGGCCGACAG CTATCCCAGA
TACGGATTTG GCAAGCTGTT CAGCCTGCTG CGGCGACAGG GATACCGGTG GAACCACAAG
CGGGTTCATC GCATCTACCG TCAACTGAAG CTGCATCTAC GGCGTAAAGG GAAGAAGCGA
CTGCCAACAC GTAACCCACA GCCCTTGGCC GTTCCACCAC AGGCCAACTG CTGCTGGTCA
GTGGACTTCA TGCATGACTC GCTCTCCAGC GGACAGCGGT TCCGTACGTT CAACGTGGAG
GATGATTACA GCCGGGAATG CCTCGCCATT GAGGTAGACA CCAGCCTCCC CGCAGCCCGG
ATATTACGGG TTCTGGACAG GGTGGCGGCA TGGCGAGGGT ATCCGGAAAA GCTGAGAATG
GACAACGGGC CGGAACTGAT CTCGATCCAG ATGGCTGAGT GGGCTGAGGC GCATGGAGTG
GAGCTGGAGT TCATCCAACC GGGCAAGCCT ACCCAAAACT CGTATGTGGA ACGATTTAAC
AGGACGTATC GGACGGAGGT TCTTGACTAC TACCTGTTCA GCAGCCTCGC GGAAGTTAAG
GAAATCACAG CGAACTGGCT GAAGCAGTAC AACGAAGAAC GGCCCCATGA GTCCTTGGGC
AACATTCCTC CGGCTGAGTA TTTGGAAATC AATTCACCCC AGAAAGTCTC TACCTTCGGG
TGGCACTAA
 
Protein sequence
MRKACAIVLI SRTLYAYAPT PRDDTDVIET LIRLADSYPR YGFGKLFSLL RRQGYRWNHK 
RVHRIYRQLK LHLRRKGKKR LPTRNPQPLA VPPQANCCWS VDFMHDSLSS GQRFRTFNVE
DDYSRECLAI EVDTSLPAAR ILRVLDRVAA WRGYPEKLRM DNGPELISIQ MAEWAEAHGV
ELEFIQPGKP TQNSYVERFN RTYRTEVLDY YLFSSLAEVK EITANWLKQY NEERPHESLG
NIPPAEYLEI NSPQKVSTFG WH